CF835141

Overview
NameCF835141
Unique NameCF835141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 232.261 bits (591), Expect = 2.016e-60
Identity = 112/195 (57.44%), Postives = 136/195 (69.74%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLM-NASQALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RC  + YQDTLY HS RQFYR+  + GTVDFIFGNAA VFQ C + ARKP   Q+N VTAQGRTDPNQ TG +IQ C+I+A+ D    L    T   YLGRPWKE+SRTV M+SY+G LI+P GW EW+G   L TLYYGEF N GPGA T+ RVKWPGY ++ + ++A+ FTV     G +WL  T + +  GL
Sbjct:  353 RCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPT---YLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.659e-60
Identity = 113/194 (58.25%), Postives = 134/194 (69.07%), Query Frame = -2
Query:  128 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGY-SLMNASQALNFTVYNFTMGDTWLPDTDIPFCGG 706
            RC F+GYQDTLYVHS +QFYRECDIYGT+DFIFGNAA VFQN ++YARKP P  K A TAQ R   +Q TGI+I NC I+AAPD      +      YLGRPW+++SRTV ++S+I DLI P GWLE      L+TLYYGE+ N GPGAN   RV WPG+  + N ++A  FTV  F  G TWL  T IPF  G
Sbjct:  341 RCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKA---YLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPFSLG 531          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.659e-60
Identity = 110/195 (56.41%), Postives = 135/195 (69.23%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGY-SLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RC  + YQDTLY HS RQFYR+  + GT+DFIFGNAA VFQ C + ARKP   Q+N VTAQGRTDPNQ TG +IQ C+I+A+ D    L    T   YLGRPWK++SRTV M+SY+G LI+P GW EW+G   L TLYYGEF N GPGA T+ RVKWPGY  + + ++A+ FTV     G +WL  T + +  GL
Sbjct:  357 RCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPT---YLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.000e-59
Identity = 114/197 (57.87%), Postives = 139/197 (70.56%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEW-NGTV-GLDTLYYGEFRNYGPGANTTMRVKWPGYSLM-NASQALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            +CS EGYQDTL VHS RQFYREC IYGTVDFIFGNAAAVFQNC I  R+P+  Q N +TAQGR DP QNTGI+I N  I+ APD    + +  T   Y+GRPW +FSRTV +Q+Y+ +++SPVGW  W  G+V GLDTL+Y E++N GP ++T  RV W G+ ++  AS A  FTV  F  G  WLP T IPF  GL
Sbjct:  343 KCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKT---YMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSGL 536          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.887e-58
Identity = 114/195 (58.46%), Postives = 133/195 (68.21%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNAS-QALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RC    YQDTLYVHS RQF+ +C + GTVDFIFGN AAVFQ+C+I+AR+P   QKN VTAQGRTDPNQNTGI IQ C I A  D      S  T   YLGRPWKE+SRTV MQS I D+I P GW EWNG   LDTL+YGE+ N G GA T+ RVKW G+ ++ +S +A  +T   F  G +WL  T  PF  GL
Sbjct:  392 RCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPT---YLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.887e-58
Identity = 108/191 (56.54%), Postives = 136/191 (71.20%), Query Frame = -2
Query:  137 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYS-LMNASQALNFTVYNFTMGDTWLPDTDIPF 706
            RCSFE YQDT+YVHS +QFYRECDIYGTVDFIFG+A+ VFQNC++YAR+P PNQK   TAQGR +  + TGI+I +  I+AAPD    +   A    YLGRPW+ +SRTV M+S+I DL+ P GWL+W     L+TLYYGE+ N GPG+N T RV+WPG+  +    +A  F+V  F  G+ WL  T IPF
Sbjct:  327 RCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDL---IPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPF 514          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.223e-57
Identity = 101/193 (52.33%), Postives = 127/193 (65.80%), Query Frame = -2
Query:  131 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDF--AKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCG 703
            C  +GYQDTLYVHS RQF+R+C + GTVDFIFG+   V QNCNI  RKPM +Q   +TAQGR+D  ++TG+ +QNC I   P +   K +N       YLGRPWKEFSRT+ M + I D+I P GWL WNG   L+TLYY E+ N GPG+N   RVKWPG   ++  QAL FT   F  G+ W+P   +P+ G
Sbjct:  381 CQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKA-----YLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKLSPKQALRFTPARFLRGNLWIPPNRVPYMG 568          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.558e-57
Identity = 110/197 (55.84%), Postives = 134/197 (68.02%), Query Frame = -2
Query:  125 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEW--NGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMN-ASQALNFTVYNFTMGDTWLPDTDIPFCGGL 706
            RCS EGYQDTL VHS RQFYREC IYGTVDFIFGNAA VFQNC I  R P+  Q N +TAQGRTD  QNTGI+I N  I+ APD    + S  T   Y+GRPW  +SRTV +++YI  ++SPVGW  W    T GLDTL+Y E++N GP ++T  RV+W G+ +++ AS A  F+V  F  G  WLP + IPF   L
Sbjct:  347 RCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKT---YMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPFTSEL 540          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.647e-57
Identity = 99/199 (49.75%), Postives = 129/199 (64.82%), Query Frame = -2
Query:  107 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGLVVSGGN 703
            C F+GYQDTLY HS RQFYR+C I GT+DF+FG+AAAVFQNC +  RKP+ NQ   +TA GR DP ++TG  +Q C+IV  PD+      + T   YLGRPWKE+SRT+ M ++I D + P GW  W G  GL+TL+Y E +N GPGA  T RV WPG   ++  + L FT   +  GD W+P   +P+  GL    G+
Sbjct:  373 CKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKT---YLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKLSDEEILKFTPAQYIQGDAWIPGKGVPYILGLFSGNGS 568          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.647e-57
Identity = 115/194 (59.28%), Postives = 132/194 (68.04%), Query Frame = -2
Query:  125 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLM-NASQALNFTVYNFTMGDTWLPDTDIPFCGGL 703
            C    YQDTLYVHS RQF+  C I GTVDFIFGNAAAV QNC+I+ARKP   QKN VTAQGRTDPNQNTGI IQ   I A  D      S  T   YLGRPWKE+SRTV MQS I DLI P GW EW+G   L+TL+YGE +N G GA T+ RVKW G+ ++ +A++A  FT  +F  G +WL  T  PF  GL
Sbjct:  394 CDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPT---YLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
The following BLAST results are available for this feature:
BLAST of CF835141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME1_SOLLC2.016e-6057.44Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME39_ARATH7.659e-6058.25Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME22_SOLLC7.659e-6056.41Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME59_ARATH1.000e-5957.87Probable pectinesterase/pectinesterase inhibitor 5... [more]
PMEU1_SOLLC1.887e-5858.46Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME40_ARATH1.887e-5856.54Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME58_ARATH1.223e-5752.33Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME60_ARATH3.558e-5755.84Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME28_ARATH4.647e-5749.75Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME1_CITSI4.647e-5759.28Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835141 ID=CF835141; Name=CF835141; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTTCTTTTTGACAATAAAAGAGAGAGTCAGCTACATTTATTTT
TTGAATAAATCATTAGAAAGTTATACACTAAACACAAATGAATGAGATGA
GATTTAGTTACCACCGCTAACAACTAATCCTCCACAAAAAGGAATATCAG
TATCAGGCAACCAAGTGTCTCCCATGGTGAAATTGTAAACTGTAAAATTC
AGAGCCTGTGAAGCATTCATGAGACTGTAACCGGGCCACTTCACTCTCAT
TGTAGTATTAGCTCCAGGGCCATAATTCCGAAACTCACCATAATACAAAG
TATCCAACCCAACCGTTCCATTCCATTCAAGCCACCCAACAGGACTTATC
AAATCTCCAATGTAAGATTGCATGTAAACTGTCCTGGAAAATTCTTTCCA
GGGCCTGCCCAGATAGTTTAATGTCGTCGCCGTGGAGTTCAAGTCCTTGG
CAAAATCTGGGGCAGCAACAATGGAGCAATTTTGTATGGCAATGCCAGTG
TTCTGATTGGGATCAGTTCTTCCCTGAGCTGTTACCGCATTCTTCTGATT
CGGCATCGGTTTTCGAGCGTATATGTTACAGTTCTGGAAGACTGCAGCTG
CATTGCCAAATATGAAATCAACGGTGCCATAAATGTCACATTCTCTGTAA
AATTGCCTTAGTGAATGGACATAAAGAGTGTCTTGGTAGCCTTCAAAACT
GCAACGG
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