CF835141

Overview
NameCF835141
Unique NameCF835141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.976e-51
Identity = 99/188 (52.66%), Postives = 127/188 (67.55%), Query Frame = -2
Query:  155 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLD--TLYYGEFRNYGPGANTTMRVKWPGYS-LMNASQALNFTVYNFTMG-DTWLP 706
            RCSF+GYQDTLY HS RQ+YR CD+ GTVDFIFG    VFQ C+I  R+P+PNQ N +TA+G  + NQNTGI+I  C+I      + + N TATT  YLGRPWK FS+TV MQS IG  ++P GW+ WN T      T++Y E++N GPG++ + RVKW GY  + +  +A  FTV  F  G D W+P
Sbjct:  780 RCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTI------SPNGNVTATT--YLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWIP 959          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.226e-49
Identity = 94/189 (49.74%), Postives = 119/189 (62.96%), Query Frame = -2
Query:  137 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPF 703
            C   GYQDTLYVH+ RQFYR C + GT+DF+FG+A AVFQNC    R+PM +Q+  VTAQGR D  + TGI I N  I     +   L   A    +LGRPWKEFSRT+ M + I D+I P GWL+WN T  L+TL+Y E+RN G G+    RV+W G   ++   A  F   NF  G+TW+P T IP+
Sbjct:  513 CHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASY---LPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISDRAAREFAPGNFLRGNTWIPQTRIPY 698          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.943e-48
Identity = 96/197 (48.73%), Postives = 118/197 (59.90%), Query Frame = -2
Query:  122 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGT-VGLDTLYYGEFRNYGPGANTTMRVKWPGYSL-MNASQALNFTVYNFTMGD-TWLPDTDIPFCGGLV 703
            C  +GYQDTLYVH+ RQFYR+C I GTVDFIFGN  AV QNC +  RKP  NQ   VTAQGRT+P Q   I +QNC I    D+    + +  +  YLGRPWKE+SRT+ MQSYI   I P GW  WN T  G DT YY E++N GPGA    R+ W G+        A  FT   +   D  WL   ++P+  G++
Sbjct:  179 CQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDY---FSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGMM 372          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.826e-46
Identity = 92/183 (50.27%), Postives = 119/183 (65.03%), Query Frame = -2
Query:  167 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPM-PNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEW--NGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGD 706
            RCS  GYQDTLY  +LRQFYRECDIYGT+DFIFGNAAAVFQ+CNI+ R+P      N + A GRTD  QNTG A+ +C I    D +   +  +   +YLGRPW+++SR + M+SYI D I+  GW  W  +G   L TLY+GEF+NYGP A  + RV W G+  +   +A  F+V     G+
Sbjct:  317 RCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYS---SYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKTLYFGEFKNYGPKARISKRVTWEGFHSIGFEEANYFSVVKRRNGE 496          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.550e-44
Identity = 90/191 (47.12%), Postives = 117/191 (61.26%), Query Frame = -2
Query:  149 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNI-----YARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATT-LNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDT 703
            C F G QDTLY HSLRQFY++C I G VDFIFGN+AAVFQ+C+I     +++       NA+TA GR D +Q+TG    NCSI    ++ K+  +      N+LGRPWKEFSRTV++   +  LISP GW+ WNG   L TLYYGE++N GPG+  + RV W   S +       ++V NF   D W   T
Sbjct:  413 CEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWS--SEIPEKHVDVYSVANFIQADEWASTT 601          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.714e-43
Identity = 89/186 (47.85%), Postives = 113/186 (60.75%), Query Frame = -2
Query:  161 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYAR----KPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATT-LNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTW 703
            C F G QDTLY H LRQFY+ C I G VDFIFGN+AAVFQ+C I        P   +KNAVTAQGR DP+Q+TG    NC I    ++ K   +      N+LGRPWK++SRTV++   +  LI+P GWL W+G   L TLYYGE +N GPG++ + RV W   S +       ++V NF   D W
Sbjct:  363 CEFLGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWS--SQIPDEHVHVYSVANFIQADEW 546          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.346e-39
Identity = 79/198 (39.90%), Postives = 111/198 (56.06%), Query Frame = -2
Query:  128 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALN------FTVYNFTMGDTWLPDTDIPFCGG 703
            C  +G+QDTLYV S RQFYR+C I GT+DF+FG    VFQNC +  R P   Q+  VTA GR   N  + +  Q+      P     L S    ++YLGRPWK++S+ V M S I  +  P G++ W G+   +T  Y E+ N GPGA+T +RVKW G  ++ ++ A        F + N T  DTW+  + +P+  G
Sbjct:  252 CQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEP----ALTSVTPKVSYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLG 445          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.271e-38
Identity = 88/194 (45.36%), Postives = 109/194 (56.19%), Query Frame = -2
Query:  125 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQ-NTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGL 703
            C F+GYQDTLYV++ RQFYR   + GTVDFIFG +A V QN  I  RK  P Q N VTA G         GI + NC I+A  +   D     T  +YLGRPWK F+ T  + + IGDLI P GW EW G     T  Y EF N GPGANT  RV W   +  +A++   FTV N+     W+ + ++P   GL
Sbjct:  395 CRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEAD---RLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWAKMA-KSAAEVERFTVANWLTPANWIQEANVPVQLGL 584          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.169e-38
Identity = 89/195 (45.64%), Postives = 114/195 (58.46%), Query Frame = -2
Query:  125 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQG-RTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTL-NYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGL 703
            C F+GYQDTLYV++ RQFYR   + GTVDFIFG +A V QN  I  RK  P Q N VTA G         GI + NC I+  PD  K+L +   T+ +YLGRPWK+F+ TV + + IGDLI P GW EW G     T  Y EF N GPGA TT R  W   +  +A++   +TV N+     W+ + ++P   GL
Sbjct:  399 CRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRII--PD--KELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPWVKVA-KSAAEVETYTVANWVGPANWIQEANVPVQLGL 588          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37
Identity = 87/194 (44.85%), Postives = 108/194 (55.67%), Query Frame = -2
Query:  125 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQG-RTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGL 703
            C F+GYQDTLYV++ RQFYR C + GTVDFIFG +A V QN  I  RK    Q N VTA G         GI +QNC IV  PD  K      T   YLGRPWK+FS TV M + +GDLI P GW  W+G     +  Y E+ N GPGA    RV W   +  +A++   FT  N+     W+ + ++P   GL
Sbjct:  399 CRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIV--PD-RKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWAKVA-RSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588          
The following BLAST results are available for this feature:
BLAST of CF835141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME26_ARATH4.976e-5152.66Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME43_ARATH1.226e-4949.74Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME_PETIN3.943e-4848.73Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME54_ARATH2.826e-4650.27Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME64_ARATH1.550e-4447.12Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME51_ARATH1.714e-4347.85Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME_MEDSA3.346e-3939.90Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME_BRANA1.271e-3845.36Probable pectinesterase/pectinesterase inhibitor O... [more]
PME37_ARATH2.169e-3845.64Probable pectinesterase/pectinesterase inhibitor V... [more]
PME4_ARATH9.111e-3744.85Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835141 ID=CF835141; Name=CF835141; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTTCTTTTTGACAATAAAAGAGAGAGTCAGCTACATTTATTTT
TTGAATAAATCATTAGAAAGTTATACACTAAACACAAATGAATGAGATGA
GATTTAGTTACCACCGCTAACAACTAATCCTCCACAAAAAGGAATATCAG
TATCAGGCAACCAAGTGTCTCCCATGGTGAAATTGTAAACTGTAAAATTC
AGAGCCTGTGAAGCATTCATGAGACTGTAACCGGGCCACTTCACTCTCAT
TGTAGTATTAGCTCCAGGGCCATAATTCCGAAACTCACCATAATACAAAG
TATCCAACCCAACCGTTCCATTCCATTCAAGCCACCCAACAGGACTTATC
AAATCTCCAATGTAAGATTGCATGTAAACTGTCCTGGAAAATTCTTTCCA
GGGCCTGCCCAGATAGTTTAATGTCGTCGCCGTGGAGTTCAAGTCCTTGG
CAAAATCTGGGGCAGCAACAATGGAGCAATTTTGTATGGCAATGCCAGTG
TTCTGATTGGGATCAGTTCTTCCCTGAGCTGTTACCGCATTCTTCTGATT
CGGCATCGGTTTTCGAGCGTATATGTTACAGTTCTGGAAGACTGCAGCTG
CATTGCCAAATATGAAATCAACGGTGCCATAAATGTCACATTCTCTGTAA
AATTGCCTTAGTGAATGGACATAAAGAGTGTCTTGGTAGCCTTCAAAACT
GCAACGG
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