CF835141

Overview
NameCF835141
Unique NameCF835141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.462e-36
Identity = 85/194 (43.81%), Postives = 107/194 (55.15%), Query Frame = -2
Query:  125 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQ-NTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGL 703
            C F+GYQDTLYV++ RQFYR   + GTVDFI G +A V QN  I  RK  P Q N VTA G+        GI + NC I+A  +   D     T  +YLGRPWK F+ T  + + IGDLI P GW EW G     T  Y EF N GPGAN   RV W   +  +A++   FTV N+     W+ + ++    GL
Sbjct:  382 CRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEAD---RLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWAKMA-KSAAEVERFTVANWLTPANWIQEANVTVQLGL 571          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.718e-35
Identity = 85/194 (43.81%), Postives = 109/194 (56.19%), Query Frame = -2
Query:  125 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDP-NQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIPFCGGL 703
            C F+GYQDTLYV++ RQFYR   + GTVDFIFG +A V QN  I  RK    Q N VTA G         GI +QNC IV     A +        +YLGRPWK+FS TV + S IGD+I P GW  W+G     +  Y E+ N GPGA T  RV W   +  +A++  +FTV N+     W+ + ++P   GL
Sbjct:  406 CRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAE---RLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNWVKIA-RSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.664e-30
Identity = 65/125 (52.00%), Postives = 80/125 (64.00%), Query Frame = -2
Query:  332 RCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGW 706
            RC  + YQDTLY +S RQFYR+C I GTVDFIFG AAAVFQ C I ARKP   Q N +TAQ R +    +G + Q C+I A+ D         T   +LGRPW+ FSR V+M+S+I D+I   GW
Sbjct:  165 RCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTP---IKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.011e-27
Identity = 65/182 (35.71%), Postives = 98/182 (53.85%), Query Frame = -2
Query:  158 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWL 703
            C   G QDTLY H  R +Y++C I G+VDFIFGNA ++++ C+++A   + ++  AVTAQGR+   ++TG +   C +            T T + YLGR W  FSR V+  +Y+ ++I P GW  W       T++YG+++  G GAN   RV W     +   +A  F    F  G  W+
Sbjct:  217 CRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHA---IADKLGAVTAQGRSSVLEDTGFSFVKCKV------------TGTGVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWA--RELTDEEAKPFLSLTFIDGSEWI 381          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26
Identity = 67/192 (34.90%), Postives = 105/192 (54.69%), Query Frame = -2
Query:  143 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIY--ARKPMPNQK---NAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDI 703
            C F G QDTL+    R ++++C I G++DFIFGNA +++Q+C I   A +  P  K    AVTA GR+  ++N+G +  NC+I              T   +LGR W+ +SR V++ + + D+I+P GW  +N      T++YGE+   GPGA+ + R   P    +N +Q       +F  GD WL  +D+
Sbjct:  216 CGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTI------------GGTGHVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRA--PYVQKLNETQVALLINTSFIDGDQWLQFSDL 393          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 56/182 (30.77%), Postives = 96/182 (52.75%), Query Frame = -2
Query:  158 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWL 703
            C    YQDTL   +   +++ C I G  DFI G+A+++++ C++++  P      ++TAQ RT   + +G     C +            T +   +LGRPW  +SR V+  S+  ++++P GW +W  +   +T+YYGE++ YGPGA+   RV+W     ++  +A  F   +F  G  WL
Sbjct:  168 CVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSP---NNGSITAQMRTSATEKSGFTFLGCKL------------TGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWS--KQLSDEEATVFLSKDFIGGKDWL 332          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 65/189 (34.39%), Postives = 100/189 (52.91%), Query Frame = -2
Query:  143 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNC--NIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDI 703
            C F G QDTL     R F++EC I G++DFIFGN  +++Q+C  N  A+        ++TAQGR   ++ +G +  NC I  + +              LGR W  ++  V+  +Y+  +I+P GW  W  +    T+ +GE + YGPGA+   RV + G  L + S+A +F   +F  GD WL  T+I
Sbjct:  216 CGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKIDGSGEI------------LLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLF-GKQLTD-SEASSFIDVSFIDGDEWLRHTNI 390          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = -2
Query:  158 CSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWL 703
            C F G QDTL     R F++ C I G++DFIFGN  +++++C +++     N    +TA G+      TG    NC I            T +   +LGR W+ ++R ++ ++Y+  ++S  GW +        T+YYGE R YGPGAN + RV +    L++  +A  FT  +F  G+ WL
Sbjct:  167 CGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAK-ENTIGCITANGKDTLKDRTGFVFVNCKI------------TGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRVTYA--KLLSDVEAAPFTNISFIDGEEWL 333          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 68/193 (35.23%), Postives = 97/193 (50.26%), Query Frame = -2
Query:  137 SFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNIYARKPM--PNQ-KNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQ--ALNFTVYNFTMGDTWLPDTDIPF 700
            SF+G+QDTLY    R +Y+ C I G +DFIFG A ++F+ C +  R  +  PN+    +TAQGR  P    G   ++C+++ +    K L         LGR WK +SR ++ +S   D I P+GW  W        + + EF   G GA+T+ RV W    L  AS+   L FT   F   + WL    I F
Sbjct:  163 SFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDCTVMGS---GKAL---------LGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEFGCTGVGADTSKRVPW----LTKASEKDVLQFTNLTFIDEEGWLSRLPIKF 339          
BLAST of CF835141 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 61/188 (32.45%), Postives = 89/188 (47.34%), Query Frame = -2
Query:  140 FEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNC--NIYARKPMPNQKNAVTAQGRTDPNQNTGIAIQNCSIVAAPDFAKDLNSTATTLNYLGRPWKEFSRTVYMQSYIGDLISPVGWLEWNGTVGLDTLYYGEFRNYGPGANTTMRVKWPGYSLMNASQALNFTVYNFTMGDTWLPDTDIP 697
            F G QDTL+    R ++  C I G VDFIFG   +++Q+C   +   +  P     +TAQGRT+P    G    NC +              T + +LGRPW+ +SR ++  S + D++ P GW  WN     + L + E   +G GAN   RVKW     ++ S   N    +F     W+ D  IP
Sbjct:  161 FAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINCLVYG------------TGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKW--VKKLSESAIQNLADLSFINRGGWVEDLPIP 334          
The following BLAST results are available for this feature:
BLAST of CF835141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME_BRACM3.462e-3643.81Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME5_ARATH1.718e-3543.81Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME56_ARATH1.664e-3052.00Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]
PME53_ARATH5.011e-2735.71Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME8_ARATH4.242e-2634.90Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME11_ARATH1.234e-2530.77Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME15_ARATH3.591e-2534.39Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]
PME14_ARATH3.970e-2432.97Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]
PME10_ARATH1.155e-2335.23Putative pectinesterase 10 OS=Arabidopsis thaliana... [more]
PME29_ARATH1.509e-2332.45Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835141 ID=CF835141; Name=CF835141; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTTCTTTTTGACAATAAAAGAGAGAGTCAGCTACATTTATTTT
TTGAATAAATCATTAGAAAGTTATACACTAAACACAAATGAATGAGATGA
GATTTAGTTACCACCGCTAACAACTAATCCTCCACAAAAAGGAATATCAG
TATCAGGCAACCAAGTGTCTCCCATGGTGAAATTGTAAACTGTAAAATTC
AGAGCCTGTGAAGCATTCATGAGACTGTAACCGGGCCACTTCACTCTCAT
TGTAGTATTAGCTCCAGGGCCATAATTCCGAAACTCACCATAATACAAAG
TATCCAACCCAACCGTTCCATTCCATTCAAGCCACCCAACAGGACTTATC
AAATCTCCAATGTAAGATTGCATGTAAACTGTCCTGGAAAATTCTTTCCA
GGGCCTGCCCAGATAGTTTAATGTCGTCGCCGTGGAGTTCAAGTCCTTGG
CAAAATCTGGGGCAGCAACAATGGAGCAATTTTGTATGGCAATGCCAGTG
TTCTGATTGGGATCAGTTCTTCCCTGAGCTGTTACCGCATTCTTCTGATT
CGGCATCGGTTTTCGAGCGTATATGTTACAGTTCTGGAAGACTGCAGCTG
CATTGCCAAATATGAAATCAACGGTGCCATAAATGTCACATTCTCTGTAA
AATTGCCTTAGTGAATGGACATAAAGAGTGTCTTGGTAGCCTTCAAAACT
GCAACGG
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