CF835142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_THEPD (50S ribosomal protein L2P OS=Thermofilum pendens (strain Hrk 5) GN=rpl2p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.019e-16 Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = -2 Query: 170 IISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 478 +++H+ N T ++LPS K + S RA IG VA GGR EKP+LKAG +H R K +P VRG AM+ HP GGG+H + R+APPG+KVG I Sbjct: 133 VLAHS--NGKTLIQLPSKKVKEVSSEARATIGMVAAGGRIEKPMLKAGKMWHWSRAKSFKYPTVRGKAMSAYAHPAGGGHHPK--GLTPAPRNAPPGRKVGHI 231
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RK2_MORIN (50S ribosomal protein L2, chloroplastic OS=Morus indica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.900e-11 Identity = 34/77 (44.16%), Postives = 44/77 (57.14%), Query Frame = -2 Query: 242 DNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 460 + + +KLPSG ++IP C A +GQV G +K L +AG+ CW P VRGV MNPV+HPHGGG Sbjct: 166 EGKSATLKLPSGEVRLIPKNCSATVGQVGNVGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGG 233
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_TROWT (50S ribosomal protein L2 OS=Tropheryma whipplei (strain Twist) GN=rplB PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.400e-11 Identity = 38/83 (45.78%), Postives = 46/83 (55.42%), Query Frame = -2 Query: 224 DNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 460 D D +KLPSG +++ CRA IG+V G R L KAG R+ W P VRGVAMNPV+HPHGGG + G Sbjct: 169 DGDFAILKLPSGEIRMVSLSCRATIGEVGNGQRLNVSLGKAG---------RSRWCGVRPSVRGVAMNPVDHPHGGGEGKTSG 242
BLAST of CF835142 vs. ExPASy Swiss-Prot
Match: RL2_TROW8 (50S ribosomal protein L2 OS=Tropheryma whipplei (strain TW08/27) GN=rplB PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.400e-11 Identity = 38/83 (45.78%), Postives = 46/83 (55.42%), Query Frame = -2 Query: 224 DNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 460 D D +KLPSG +++ CRA IG+V G R L KAG R+ W P VRGVAMNPV+HPHGGG + G Sbjct: 169 DGDFAILKLPSGEIRMVSLSCRATIGEVGNGQRLNVSLGKAG---------RSRWCGVRPSVRGVAMNPVDHPHGGGEGKTSG 242 The following BLAST results are available for this feature:
BLAST of CF835142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835142 ID=CF835142; Name=CF835142; organism=Citrus sinensis; type=EST; length=479bpback to top |