CF835143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_SODGM (50S ribosomal protein L2 OS=Sodalis glossinidius (strain morsitans) GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.711e-21 Identity = 63/182 (34.62%), Postives = 94/182 (51.65%), Query Frame = 1 Query: 88 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G+ + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + I S CRA +G+V + L KAG + R P VRG AMNPV+HP Sbjct: 62 YRLIDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGEQIQSGVDAAIKAGNALPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGAYVTLRLRSGEMRKIQSECRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_OCEIH (50S ribosomal protein L2 OS=Oceanobacillus iheyensis GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.711e-21 Identity = 74/211 (35.07%), Postives = 107/211 (50.71%), Query Frame = 1 Query: 19 RAQRKGAGSVFLSHTH--HRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 R R G + + H H++ Q+R +DF + G VA I +DP R A +A V + +K IA +G+ GQ + G+ A + +GN LP+ SIP G V+ N+E G G +AR++G A I+ + T V+L SG ++I + CRA IGQV G E L++ G A R+ W P VRG MNP +HP Sbjct: 40 RGGRNNQGKLTVRHQGGGHKR---QYRIIDFKRDKDGIPGRVATIEYDPNRSANIALVHYADG-----EKRYIIAPKGIKVGQEIESGENADIKLGNALPLGSIPVGTVIHNIELKPGRGGQIARSAGAEAQILGR--EEKYTLVRLSSGEVRLILTTCRATIGQV---GNIEHELVRVGKA------GRSRWKGIRPTVRGSVMNPNDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_MYCS5 (50S ribosomal protein L2 OS=Mycoplasma synoviae (strain 53) GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.711e-21 Identity = 69/204 (33.82%), Postives = 99/204 (48.53%), Query Frame = 1 Query: 22 AQRKGAGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 A R G + + H H + +R +DF + VV I +DP R A + + + +K IA +G+ GQ V G+ A ++VGN LP+ +IPEG + N+E G LAR++G A I+ + + VKL SG + I + CRA +G V G E L+ G A R P VRG MNPV+HP Sbjct: 42 AGRNNQGKITVRH-HGGRVKRFYRLVDFKRNKDNIPAVVKTIEYDPNRSANICLLAYADG-----EKRYIIAPKGIKVGQKVVSGEGADIIVGNSLPLSNIPEGTFIHNIEMQPGGGAKLARSAGTSAQILGKDDNGKYVVVKLKSGETRRILARCRATVGMV---GNEEYSLVNVGKA--GINRHRGIRPTVRGSVMNPVDHP 234
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RK2_PINTH (50S ribosomal protein L2, chloroplastic OS=Pinus thunbergii GN=rpl2 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.711e-21 Identity = 67/203 (33.00%), Postives = 103/203 (50.74%), Query Frame = 1 Query: 31 KGAGSVFLSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 KG + HR G + +R +DF ++ G + I +DP R A + +V +++ K + G+ G + G KA + +GN LP+ ++P G + N+E +G G LARA+G A +I+ + T R LPSG ++I C A IGQV + KAG ++ KR+ +VRGVAMNPV+HP Sbjct: 42 KGRNGRGIITARHRGGGHKRLYRQIDFRRNKEHISGEIVTIEYDPNRSAYICKVHYKNG-----DKMYILHPRGVMIGDTILSGPKAPISIGNALPLTNMPLGTAIHNIEITLGKGGQLARAAGAVAELIAKEDRSATLR--LPSGEVRLISENCSATIGQVGNITANNRSFGKAG--AKRWLGKRS---EVRGVAMNPVDHP 232
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RK2_MORIN (50S ribosomal protein L2, chloroplastic OS=Morus indica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.711e-21 Identity = 65/207 (31.40%), Postives = 100/207 (48.31%), Query Frame = 1 Query: 31 KGAGSVFLSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 KG + + HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + + +KLPSG ++IP C A +GQV G +K L +AG+ CW P VRGV MNPV+HP Sbjct: 39 KGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGKIVTIEYDPNRNAYICLIHYGGG-----EKRYILHPRGALIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLIPKNCSATVGQVGNVGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHP 229
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RK2_CHAVU (50S ribosomal protein L2, chloroplastic OS=Chara vulgaris GN=rpl2 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.711e-21 Identity = 65/207 (31.40%), Postives = 105/207 (50.72%), Query Frame = 1 Query: 19 RAQRKGAGSVFLSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 + +KG + + + HR G + +R +DF + + G+V I +DP R + + V + +K + G+ G + A++ VGN LP+ IP G + N+E G G L RA+G A +++ + T ++LPSG ++I C A IGQV + + KAG+ +++ KR PKVRG AMNPV+HP Sbjct: 37 KMSKKGRNNQGIITSRHRGGGHKRLYRKIDFRRKKIGIYGIVKTIEYDPNRNSHICLVNYEDG-----EKRYILYPRGIKIGDTILSSMDASIFVGNTLPLTQIPLGTAIHNIELQPGKGGQLVRAAGTVAQVVA--KEGKWTSIRLPSGEVRLIYQKCLATIGQVGNPEFNNQSIGKAGS--KRWQGKR---PKVRGTAMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_TREDE (50S ribosomal protein L2 OS=Treponema denticola GN=rplB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.459e-21 Identity = 65/188 (34.57%), Postives = 101/188 (53.72%), Query Frame = 1 Query: 85 QFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 ++R +DF +RN Y + G V I +DP R A +A + + +K IA +G+ GQ + G+ ATL V N LP+ +IP G V N+E +G G +AR++G A++ + + + ++LPSG +++ C A IG+V L KAG R+ W P VRG+AMNP++HP Sbjct: 61 KYRQIDF-KRNKYGIPGTVRTIEYDPNRSANIALIFYADG-----EKRYIIAPKGLKIGQKIMSGEMATLDVANALPLEAIPVGFTVHNIELTIGRGGQMARSAGAGALVAA--KEGEYVTIRLPSGETRLVNKKCYATIGEVGNEDHMNTSLGKAG---------RSRWLGIRPTVRGMAMNPIDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_SALTY (50S ribosomal protein L2 OS=Salmonella typhimurium GN=rplB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.459e-21 Identity = 69/212 (32.55%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 10 PLIRAQRKGAG---SVFLSHTHHRKGPAQ-FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 PL+ K G + ++ H G Q +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HP Sbjct: 32 PLVEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_SALTI (50S ribosomal protein L2 OS=Salmonella typhi GN=rplB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.459e-21 Identity = 69/212 (32.55%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 10 PLIRAQRKGAG---SVFLSHTHHRKGPAQ-FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 PL+ K G + ++ H G Q +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HP Sbjct: 32 PLVEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_SALSV (50S ribosomal protein L2 OS=Salmonella schwarzengrund (strain CVM19633) GN=rplB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.459e-21 Identity = 69/212 (32.55%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 10 PLIRAQRKGAG---SVFLSHTHHRKGPAQ-FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 PL+ K G + ++ H G Q +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HP Sbjct: 32 PLVEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHP 231 The following BLAST results are available for this feature:
BLAST of CF835143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835143 ID=CF835143; Name=CF835143; organism=Citrus sinensis; type=EST; length=633bpback to top |