CF835143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_CANGA (60S ribosomal protein L2 OS=Candida glabrata GN=RPL2 PE=4 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 4.911e-81 Identity = 138/210 (65.71%), Postives = 174/210 (82.86%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG +IR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++GVV +I+HD GRGAPLA+V FR P++Y ++E+FIA EG++TGQF+Y GKKA+L VGNVLP+ S+PEG +V NVE GDRG LARASG+Y +II HNPD + TRV+LPSGAKKII S R +IG +AGGGRT+KPLLKAG A+HK+++KRN WPK RGVAMNPV+HP Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRDPYKYKLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKIISSDARGVIGVIAGGGRTDKPLLKAGRAFHKYKLKRNSWPKTRGVAMNPVDHP 210
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL8_CAEEL (60S ribosomal protein L8 OS=Caenorhabditis elegans GN=rpl-8 PE=1 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 8.377e-81 Identity = 134/210 (63.81%), Postives = 170/210 (80.95%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG IR QRKGAG +F SH HRKG ++ R LD+ ER+GY+KG+V +IIHDPGRGAPLA + FR P++Y K +AAEGM+TGQF++CG KA + +GN++PV ++PEG +CNVE+ GDRGV+ARASG+YA +I+HNPD TR++LPSGAKK++ S RAMIG VAGGGRT+KPLLKAG +YHK++ KRN WP+VRGVAMNPVEHP Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAIIAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHP 210
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_YEAST (60S ribosomal protein L2 OS=Saccharomyces cerevisiae GN=RPL2A PE=1 SV=3) HSP 1 Score: 298.901 bits (764), Expect = 1.429e-80 Identity = 136/210 (64.76%), Postives = 173/210 (82.38%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG +IR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++G+V +I+HD GRGAPLA+V FR P++Y ++E+FIA EG++TGQF+Y GKKA+L VGNVLP+ S+PEG +V NVE GDRG LARASG+Y +II HNPD + TRV+LPSGAKK+I S R +IG +AGGGR +KPLLKAG A+HK+R+KRN WPK RGVAMNPV+HP Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSWPKTRGVAMNPVDHP 210
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_SCHPO (60S ribosomal protein L2 OS=Schizosaccharomyces pombe GN=rpl2a PE=2 SV=2) HSP 1 Score: 298.516 bits (763), Expect = 1.866e-80 Identity = 137/210 (65.24%), Postives = 167/210 (79.52%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG +IRAQRK +G +F +HT RKG AQ R+LDF ER+GY++GVV +IIHDPGRGAPLA+V FR+P+ Y E F+A EGMYTGQFVYCGK A L VGNVLPV +PEG ++ NVE GDRG L R+SG+Y +I+ H+ D TRVKLPSGAKK++PS R ++G VAGGGR +KPLLKAG A+HK+RVKRNCWP+ RGVAMNPV+HP Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAKVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKAGDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLLKAGRAFHKYRVKRNCWPRTRGVAMNPVDHP 209
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_ASHGO (60S ribosomal protein L2 OS=Ashbya gossypii GN=RPL2 PE=4 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 4.597e-79 Identity = 132/210 (62.86%), Postives = 170/210 (80.95%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSVFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG +IR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++GVV +I+HD GRGAPLA+V FR P++Y ++E FIA EG++TGQF+Y GK A+L VGN+LP+ S+PEG +V NVE GDRG LAR SG+Y ++I HNPD + TR++LPSGAKKI+ S R +IG +AGGGR +KPLLKAG A+HK++VKRN WPK RGVAMNPV+HP Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRDPYKYKLREETFIANEGVHTGQFIYAGKNASLNVGNILPLGSVPEGTIVSNVEERPGDRGALARTSGNYVIVIGHNPDENKTRIRLPSGAKKIVSSDARGVIGVIAGGGRVDKPLLKAGRAFHKYKVKRNSWPKTRGVAMNPVDHP 210
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METM5 (50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl2p PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.640e-47 Identity = 100/211 (47.39%), Postives = 131/211 (62.09%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + +Q +G G+ + S TH RKG ++RS D E++G + G V +I+HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLP+ IPEG V N+E GD G L R+ G YA +ISH D T VKLPSG K++ CRA +G VAGGGR EKP +KAG YH K WPKVRGVAMN V+HP Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVAKVRFAND-----EERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRSGGCYAHVISH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPFVKAGKKYHSLSAKAVAWPKVRGVAMNAVDHP 204
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METMP (50S ribosomal protein L2P OS=Methanococcus maripaludis GN=rpl2p PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.350e-46 Identity = 99/211 (46.92%), Postives = 131/211 (62.09%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + +Q +G G+ + S TH RKG ++RS D E++G + G V +I+HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLP+ IPEG V N+E GD G L R+ G YA +ISH D T V+LPSG K++ CRA +G VAGGGR EKP +KAG YH K WPKVRGVAMN V+HP Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVIDILHDPGRSAPVAKVKFAND-----EERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRSGGCYAHVISH--DVGKTIVRLPSGFSKVLNPACRATVGVVAGGGRKEKPFVKAGKKYHSLSAKAVAWPKVRGVAMNAVDHP 204
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METM7 (50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl2p PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.303e-46 Identity = 98/211 (46.45%), Postives = 131/211 (62.09%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + +Q +G G+ + S TH RKG ++RS D E++G + G V +I+HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLP+ IPEG V N+E GD G L R+ G YA ++SH D T VKLPSG K++ CRA +G VAGGGR EKP +KAG +H K WPKVRGVAMN V+HP Sbjct: 1 MGKRLISQNRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVAKVRFAND-----EERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRSGGCYAHVVSH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPFVKAGKKHHSLSAKAIAWPKVRGVAMNAVDHP 204
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METJA (50S ribosomal protein L2P OS=Methanocaldococcus jannaschii GN=rpl2p PE=3 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 3.928e-46 Identity = 98/211 (46.45%), Postives = 132/211 (62.56%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + +QR+G GS V+ +H R+G A++R D E+ G + G + +I+HDPGR AP+A+V + ++ L + EG+ G + CG A + GN+LP+ +IPEG V N+E GD G L RA G YA I++H D + T VKLPSG K + S CRA IG VAGGGR EKP +KAG YH + K WP+VRGVAMN V+HP Sbjct: 1 MGKRLISQRRGRGSSVYTCPSHKRRGEAKYRRFDELEKKGKVLGKIVDILHDPGRSAPVAKVEYE-----TGEEGLLVVPEGVKVGDIIECGVSAEIKPGNILPLGAIPEGIPVFNIETVPGDGGKLVRAGGCYAHILTH--DGERTYVKLPSGHIKALHSMCRATIGVVAGGGRKEKPFVKAGKKYHAMKAKAVKWPRVRGVAMNAVDHP 204
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_METM6 (50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl2p PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.699e-46 Identity = 97/211 (45.97%), Postives = 131/211 (62.09%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FLSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 MG + +Q +G G+ + S +H RKG ++RS D E++G + G V +I+HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLP+ IPEG V N+E GD G L R+ G YA ++SH D T VKLPSG K++ CRA +G VAGGGR EKP +KAG +H K WPKVRGVAMN V+HP Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGAVKYRSYDEMEKDGKILGTVVDILHDPGRSAPVAKVRFAND-----EERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRSGGCYAHVVSH--DVGKTIVKLPSGFSKVLNPACRATVGVVAGGGRKEKPFVKAGKKHHSLSAKAIAWPKVRGVAMNAVDHP 204 The following BLAST results are available for this feature:
BLAST of CF835143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835143 ID=CF835143; Name=CF835143; organism=Citrus sinensis; type=EST; length=633bpback to top |