CF835143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RK2_PORYE (50S ribosomal protein L2, chloroplastic OS=Porphyra yezoensis GN=rpl2 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.981e-19 Identity = 66/187 (35.29%), Postives = 88/187 (47.06%), Query Frame = 1 Query: 85 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 Q+R +DF + VA I +DP R A +A + + +K + + G V G A + VGN LP+ SIP G V N+E G + RA+G YA I++ + VKLPS ++I C A IGQV + L KAG RN W P VRGV MNPV+HP Sbjct: 61 QYRLIDFKRNRHNIVAKVASIEYDPNRNARIALLHYLDG-----EKRYILHPRSLSVGSMVLSGPTAPIEVGNALPLSSIPLGTAVHNIELRPSCGGQIVRAAGTYAQIVA--KEGTFVTVKLPSSEVRMIRKECYATIGQVGNIDASNITLGKAG---------RNRWLGKRPTVRGVVMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RK2_ILLOL (50S ribosomal protein L2, chloroplastic OS=Illicium oligandrum GN=rpl2 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.981e-19 Identity = 63/207 (30.43%), Postives = 98/207 (47.34%), Query Frame = 1 Query: 31 KGAGSVFLSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 KG + + T HR G + +R ++F + G + I +DP R A + + + +K + G G + G + + +GN LP+ + G + N+E +G G LARA+G A +I+ + T R LPSG +++ C A +GQV G +K L +AG+ CW P VRGV MNPV+HP Sbjct: 41 KGRNARGVITTGHRGGGHKRLYRKINFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGARIGDTIVSGTEVPISMGNALPLTDMSLGTAIHNIEITLGKGGQLARAAGTVAKLIAKEGKSATLR--LPSGEVRLVSKNCSATVGQVGNVGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RK2_DAUCA (50S ribosomal protein L2, chloroplastic OS=Daucus carota GN=rpl2-A PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.981e-19 Identity = 64/203 (31.53%), Postives = 100/203 (49.26%), Query Frame = 1 Query: 31 KGAGSVFLSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 KG + + HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP+ +P G + N+E G G LARA+G A +I+ + + +KLPSG ++I C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HP Sbjct: 39 KGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS--KRWLGKR---PVVRGVVMNPVDHP 229
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_SHEDO (50S ribosomal protein L2 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19 Identity = 65/204 (31.86%), Postives = 100/204 (49.02%), Query Frame = 1 Query: 28 RKGAGSVFLSHTH--HRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 R G + + H H++ +R +DF + V I +DP R A +A V + ++ +AA+GM +G + G + + GN +P+R+IP G+VV VE G +AR++G Y +I+ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HP Sbjct: 43 RNNTGRITVRHVGGGHKQ---HYRLIDFKRNKDGIPAKVERIEYDPNRTAHIALVLYADG-----ERRYILAAKGMKSGDPIQSGVGSEIKTGNSMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVIAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG-----AKRWRGVRPTVRGVAMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_RICPR (50S ribosomal protein L2 OS=Rickettsia prowazekii GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19 Identity = 62/195 (31.79%), Postives = 99/195 (50.77%), Query Frame = 1 Query: 67 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 633 HR G + +R +DF + + +V I +DP R A +A + + + +A + + G V + A + +GN LP++SIP G + NVE +G G +AR++G ++ D+ ++KL SG +++P C+A IG ++ + L KAG RN W P VRGVAMNPV+HP Sbjct: 53 HRGGGHKKLYRVIDFKRKKIDISAIVERIEYDPNRTAFIALIKYDDG-----EYSYILAPQKLSIGDRVISSQAADIKIGNCLPLKSIPIGTTLHNVEMKIGKGGQIARSAGTSVELV--GKDSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_RALEJ (50S ribosomal protein L2 OS=Ralstonia eutropha (strain JMP134) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19 Identity = 70/208 (33.65%), Postives = 104/208 (50.00%), Query Frame = 1 Query: 16 IRAQRKGAGSVFLSHTHHRKGPAQFRSLDF--GERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 I + KG G H HH +R +DF +++G + V + +DP R A +A V F ++ IA +GM GQ + G +A + GN LP+R+IP G + NVE G +ARA+G AV+++ + +V+L SG + + CRA IG+V + + + KAG R P VRGV MNPV+HP Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFKRNDKDG-IAAKVERLEYDPNRSANIALVLFADG-----ERRYIIATKGMVAGQALLNGAEAPIKAGNNLPIRNIPVGTTINNVEILPGKGAQVARAAGGSAVLLAR--EGLYAQVRLRSGEVRRVHIECRATIGEVGNEEHSLRVIGKAGATRW-----RGIRPTVRGVVMNPVDHP 232
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_RALEH (50S ribosomal protein L2 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19 Identity = 70/208 (33.65%), Postives = 104/208 (50.00%), Query Frame = 1 Query: 16 IRAQRKGAGSVFLSHTHHRKGPAQFRSLDF--GERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 I + KG G H HH +R +DF +++G + V + +DP R A +A V F ++ IA +GM GQ + G +A + GN LP+R+IP G + NVE G +ARA+G AV+++ + +V+L SG + + CRA IG+V + + + KAG R P VRGV MNPV+HP Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFKRNDKDG-IPARVERLEYDPNRSANIALVLFADG-----ERRYIIATKGMVAGQPLMNGSEAPIKAGNNLPIRNIPVGTTINNVEMLPGKGSQIARAAGGSAVLLAR--EGLYAQVRLRSGEVRRVHIECRATIGEVGNEEHSLRVIGKAGATRW-----RGIRPTVRGVVMNPVDHP 232
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_PSYIN (50S ribosomal protein L2 OS=Psychromonas ingrahamii (strain 37) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19 Identity = 60/182 (32.97%), Postives = 91/182 (50.00%), Query Frame = 1 Query: 88 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 +R +DF + V + +DP R A +A V + ++ +A +G+ G + G+ A++ VGN LP+R+IP G V VE +AR++G Y+ I++ D ++L SG + IP+ CRA IG+V + L KAG R P VRGV MNPV+HP Sbjct: 62 YRIVDFKRNKDGIPAKVERLEYDPNRSANIALVLYSDG-----ERRYILAPKGLVAGDQIISGEDASIKVGNCLPMRNIPVGTTVHAVEMKPAKGAQIARSAGAYSQIVAR--DGAYVTLRLRSGEMRKIPTECRATIGEVGNAEHMLRQLGKAGATRW-----RGVRPTVRGVVMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_PSEHT (50S ribosomal protein L2 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19 Identity = 60/183 (32.79%), Postives = 92/183 (50.27%), Query Frame = 1 Query: 88 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHP 633 +R +DF + V + +DP R A +A V + ++ IA +G+ G + G A + GN LP+R++P G+ V NVE G +AR++G Y I++ D ++L SG + + + CRA +G+V + L KAG N + R P VRGVAMNPV+HP Sbjct: 62 YRLIDFKRTKDGIPATVERLEYDPNRSANIALVLYADG-----ERRYIIAPKGLKAGDAIQSGVDAPIKPGNALPMRNMPVGSTVHNVELKPGKGAQIARSAGAYVQILAR--DGQYVTLRLRSGEVRKVEADCRATLGEVGNAEHMLRSLGKAGANRWRGIR------PTVRGVAMNPVDHP 231
BLAST of CF835143 vs. ExPASy Swiss-Prot
Match: RL2_NITEC (50S ribosomal protein L2 OS=Nitrosomonas eutropha (strain C91) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19 Identity = 63/192 (32.81%), Postives = 97/192 (50.52%), Query Frame = 1 Query: 58 HTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 633 H HH +R +DF + V I +DP R A LA + + +++ IAA+ + G +V G + + GN LP+R+IP G+V+ +E G LAR++G A +++ + D ++++L SG + I CRA IG+V + + KAG R P VRGVAMNPV+HP Sbjct: 58 HKHH------YRIVDFCRNKDDIPAKVERIEYDPNRSAYLALLCYADG-----ERKYIIAAKDIEVGSYVVNGSGSPVKTGNALPIRNIPVGSVIHCIELKPGKGAQLARSAGSSAQLMAR--EGDYSQIRLRSGEIRKIHINCRATIGEVGNSEHNLQSIGKAGAVRW-----RGIRPTVRGVAMNPVDHP 231 The following BLAST results are available for this feature:
BLAST of CF835143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835143 ID=CF835143; Name=CF835143; organism=Citrus sinensis; type=EST; length=633bpback to top |