CF835151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.436e-18 Identity = 46/68 (67.65%), Postives = 48/68 (70.59%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGD NL FVE PALAPP+V ID A+QPLPDDDDD E Sbjct: 154 AKSNYNFEKPFLYLARKLAGDGNLHFVETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 7.436e-18 Identity = 46/68 (67.65%), Postives = 48/68 (70.59%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGD NL FVE PALAPP+V ID A+QPLPDDDDD E Sbjct: 154 AKSNYNFEKPFLYLARKLAGDGNLHFVETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSJ (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. japonica GN=RAN2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.712e-18 Identity = 46/68 (67.65%), Postives = 47/68 (69.12%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGDPNL FVE AL PPEV ID A+QPLPDDDDD E Sbjct: 154 AKSNYNFEKPFLYLARKLAGDPNLHFVEAVALKPPEVPIDLAMQQQHEAELAAAAAQPLPDDDDDLIE 221
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSI (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. indica GN=RAN2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.712e-18 Identity = 46/68 (67.65%), Postives = 47/68 (69.12%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGDPNL FVE AL PPEV ID A+QPLPDDDDD E Sbjct: 154 AKSNYNFEKPFLYLARKLAGDPNLHFVEAVALKPPEVPIDLAMQQQHEAELAAAAAQPLPDDDDDLIE 221
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN_CAEEL (GTP-binding nuclear protein ran-1 OS=Caenorhabditis elegans GN=ran-1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.187e-15 Identity = 42/65 (64.62%), Postives = 44/65 (67.69%), Query Frame = -1 Query: 297 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDD 491 AKSNYNFEKPFL+LARKL GDPNL FV PALAPPEVQ+D A LPDDDDD Sbjct: 150 AKSNYNFEKPFLWLARKLLGDPNLEFVAMPALAPPEVQMDPAMIAEYEKDLDNAAKADLPDDDDD 214
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: SPI1_SCHPO (GTP-binding nuclear protein spi1 OS=Schizosaccharomyces pombe GN=spi1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15 Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = -1 Query: 300 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDD 491 AKSNYNFEKPFL+LARKL G+PNL FV PALAPPEVQ+D A+ PLPD+DD Sbjct: 150 AKSNYNFEKPFLWLARKLVGNPNLEFVASPALAPPEVQVDQQLLAQYQQEMNEAAAMPLPDEDD 213
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN_DANRE (GTP-binding nuclear protein Ran OS=Danio rerio GN=ran PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.512e-15 Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = -1 Query: 297 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDD 491 AKSNYNFEKPFL+LARKL GDPNL FVE PALAPPE+ +D + LPD+DDD Sbjct: 150 AKSNYNFEKPFLWLARKLIGDPNLEFVEMPALAPPEIAMDPTLAAQYEHDLKVASETALPDEDDD 214
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: GSP2_YEAST (GTP-binding nuclear protein GSP2/CNR2 OS=Saccharomyces cerevisiae GN=GSP2 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.892e-15 Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = -1 Query: 300 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDD 491 AKSNYNFEKPFL+LARKLAG+P L FV PALAPPEVQ+D + PLPD+DD Sbjct: 154 AKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQVDEQLMHQYQQEMDQATALPLPDEDD 217
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: GSP1_YEAST (GTP-binding nuclear protein GSP1/CNR1 OS=Saccharomyces cerevisiae GN=GSP1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.892e-15 Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = -1 Query: 300 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDD 491 AKSNYNFEKPFL+LARKLAG+P L FV PALAPPEVQ+D + PLPD+DD Sbjct: 153 AKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQVDEQLMQQYQQEMEQATALPLPDEDD 216
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: GSP1_CANGA (GTP-binding nuclear protein GSP1/Ran OS=Candida glabrata GN=GSP1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.892e-15 Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = -1 Query: 300 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDD 491 AKSNYNFEKPFL+LARKLAG+P L FV PALAPPEVQ+D + PLPD+DD Sbjct: 148 AKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQVDEQLMQQYQQEMEQATALPLPDEDD 211 The following BLAST results are available for this feature:
BLAST of CF835151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835151 ID=CF835151; Name=CF835151; organism=Citrus sinensis; type=EST; length=491bpback to top |