CF835154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_YERP3 (Nucleoside diphosphate kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ndk PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.729e-22 Identity = 50/114 (43.86%), Postives = 73/114 (64.04%), Query Frame = -3 Query: 334 VGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 675 +G I RFE GF++ K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D A N +HGSD+VESAQ+EIA +F Sbjct: 20 IGAIYARFESAGFNIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFADSFTANAVHGSDAVESAQREIAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_VIBHB (Nucleoside diphosphate kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ndk PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.729e-22 Identity = 52/124 (41.94%), Postives = 75/124 (60.48%), Query Frame = -3 Query: 319 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 690 V+R L+GEI R EK G + K++ + A Y + KPFF +L E++TSGP++ + EGE + R ++G TNP ++A GTIR D A+ N +HGSDS ESA +EI +FP+ I Sbjct: 15 VERNLIGEIYHRIEKAGLRIVAAKMVHLTEEQASGFYAEHEGKPFFPALKEFMTSGPIMVQVLEGEDAIARYRELMGKTNPEEAACGTIRADYALSMRHNSVHGSDSPESAAREIEFFFPESEI 138
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_RHOCS (Nucleoside diphosphate kinase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=ndk PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.729e-22 Identity = 54/118 (45.76%), Postives = 74/118 (62.71%), Query Frame = -3 Query: 334 QRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 687 +R L G+I RFE+ G + K + + R AE+ Y + +PF+G L+ ++ SGPVV + EGE V R I+GATNPA +APGTIR D A N +HGSDS+E+A EIA +F Sbjct: 16 RRNLTGKINARFEEAGLRIVAQKRIRLTREQAEQFYIVHAERPFYGELVSFMISGPVVVQVLEGENAVARNREIMGATNPANAAPGTIRKDFAESIEANSVHGSDSLENAATEIAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_YERPB (Nucleoside diphosphate kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ndk PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22 Identity = 50/114 (43.86%), Postives = 72/114 (63.16%), Query Frame = -3 Query: 334 VGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 675 +G I RFE GF + K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D A N +HGSD+VESAQ+EIA +F Sbjct: 20 IGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFADSFTANAVHGSDAVESAQREIAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_COXBN (Nucleoside diphosphate kinase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ndk PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22 Identity = 51/122 (41.80%), Postives = 76/122 (62.30%), Query Frame = -3 Query: 328 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PD 690 V + ++G+I RFEK G + K+ + +P AEK Y +PF+ L++++T GPV+ + EGE + R I+GATNP ++ PGTIR D A N +HGSD E+A++EIA +F PD Sbjct: 15 VAKNVIGQIYSRFEKAGLKIIAAKMCHLSKPQAEKFYAVHKDRPFYPDLVKFMTQGPVMIQVLEGENAIVKNREIMGATNPKEALPGTIRADFADSIDANAVHGSDGPETAKEEIAFFFKPD 136
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_COXB1 (Nucleoside diphosphate kinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ndk PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22 Identity = 51/122 (41.80%), Postives = 76/122 (62.30%), Query Frame = -3 Query: 328 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PD 690 V + ++G+I RFEK G + K+ + +P AEK Y +PF+ L++++T GPV+ + EGE + R I+GATNP ++ PGTIR D A N +HGSD E+A++EIA +F PD Sbjct: 15 VAKNVIGQIYSRFEKAGLKIISAKMCHLSKPQAEKFYAVHKDRPFYPDLVKFMTQGPVMIQVLEGENAIVKNREIMGATNPKEALPGTIRADFADSIDANAVHGSDGPETAKEEIAFFFKPD 136
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_CAMC5 (Nucleoside diphosphate kinase OS=Campylobacter curvus (strain 525.92) GN=ndk PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22 Identity = 53/119 (44.54%), Postives = 75/119 (63.03%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V++ +VG+II RFE G + K + + + A+ Y S +PFF L+E++TSGPVV M+ EGE V R ++GATNP ++A GTIR D A N +HGSDS+E+A EI +F Sbjct: 13 VKKNVVGKIIDRFESNGLRIAAAKKVKLSKCDAKAFYAVHSERPFFNDLVEFMTSGPVVVMVLEGENAVAKNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSLENAINEINFFF 131
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_YERPP (Nucleoside diphosphate kinase OS=Yersinia pestis (strain Pestoides F) GN=ndk PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.655e-22 Identity = 49/114 (42.98%), Postives = 73/114 (64.04%), Query Frame = -3 Query: 334 VGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 675 +G I RFE+ GF + K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D + N +HGSD+VESAQ+EIA +F Sbjct: 20 IGAIYARFERAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFSDSFTANAVHGSDAVESAQREIAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_YERPN (Nucleoside diphosphate kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ndk PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.655e-22 Identity = 49/114 (42.98%), Postives = 73/114 (64.04%), Query Frame = -3 Query: 334 VGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 675 +G I RFE+ GF + K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D + N +HGSD+VESAQ+EIA +F Sbjct: 20 IGAIYARFERAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFSDSFTANAVHGSDAVESAQREIAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_YERPG (Nucleoside diphosphate kinase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ndk PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.655e-22 Identity = 49/114 (42.98%), Postives = 73/114 (64.04%), Query Frame = -3 Query: 334 VGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 675 +G I RFE+ GF + K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D + N +HGSD+VESAQ+EIA +F Sbjct: 20 IGAIYARFERAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFSDSFTANAVHGSDAVESAQREIAYFF 133 The following BLAST results are available for this feature:
BLAST of CF835154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835154 ID=CF835154; Name=CF835154; organism=Citrus sinensis; type=EST; length=692bpback to top |