CF835154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PHEZH (Nucleoside diphosphate kinase OS=Phenylobacterium zucineum (strain HLK1) GN=ndk PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 55/123 (44.72%), Postives = 75/123 (60.98%), Query Frame = -3 Query: 319 QRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 687 +R L G++ E G + K + + R AEK YE +PFFG L+E++TS PVV + EGE V R ++GATNPAQ+A GTIR A G N +HGSDS+E+A+ EIA +F + I Sbjct: 15 RRNLTGKVNAVIEDAGLRIVAQKRIRMSRAQAEKFYEVHKERPFFGELVEFMTSAPVVVQVLEGENAVARYREVMGATNPAQAADGTIRKLYAESVGENSVHGSDSLENAKIEIAQFFTEDEI 137
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PERMH (Nucleoside diphosphate kinase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=ndk PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 50/119 (42.02%), Postives = 75/119 (63.03%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V+R L G+II +++GF L LK + + + A++ Y +PF+ L E+++SGP+VAM+WEGE + R I+GATNP ++ GT+R G N +HGSDS ESA+ EI +F Sbjct: 15 VRRNLEGKIIAHVQEKGFKLVALKKLKLTKEQAQQFYIVHKDRPFYDELCEFMSSGPIVAMVWEGENAISRIREIMGATNPEEAEEGTLRKLYGTNVGENAVHGSDSPESAKVEIPFFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_HELHP (Nucleoside diphosphate kinase OS=Helicobacter hepaticus GN=ndk PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 50/119 (42.02%), Postives = 74/119 (62.18%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V++G++G+II RFE + +K + + R AE Y +PFF L++++ SGPVV M+ EG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EIA +F Sbjct: 13 VKKGVIGKIIDRFESNNLRICAMKKLQLTRCDAEAFYAIHKERPFFKDLVDFMISGPVVVMVLEGNNAVMKNRDLMGATNPKEAEAGTIRADFAQSIDANAVHGSDSLENAKNEIAFFF 131
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_CHLAB (Nucleoside diphosphate kinase OS=Chlamydophila abortus GN=ndk PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 53/119 (44.54%), Postives = 73/119 (61.34%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + +GEII FEK GF + +K++ + AE Y S+PFF L++++ SGPVV M+ EG V R I+GATNP ++APGTIR G N +HGSDS+E+A EI +F Sbjct: 13 VGKAHIGEIIAIFEKSGFRIAAMKMLHLSVKEAEGFYAVHKSRPFFQELVDFMISGPVVVMVLEGNNAVARNREIMGATNPQEAAPGTIRAQFGESIGINAVHGSDSLENAAIEINYFF 131
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_AGRT5 (Nucleoside diphosphate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndk PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = -3 Query: 319 QRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 687 +R L G I FE G + K + + + AE Y +PFFG L+E +TSGP + + EGE + R I+GATNPAQ+A GTIR A+ G N +HGSD+ E+A +EIA WF + I Sbjct: 16 KRNLTGAITKVFEDNGLRIVASKRVWMSKREAEGFYAVHKERPFFGELVEGMTSGPTIVQVLEGENAILKNREIMGATNPAQAAEGTIRKSFALSIGENSVHGSDAPETAAQEIAYWFAETEI 138
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK2_PARUW (Nucleoside diphosphate kinase 2 OS=Protochlamydia amoebophila (strain UWE25) GN=ndk2 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 50/114 (43.86%), Postives = 71/114 (62.28%), Query Frame = -3 Query: 334 VGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 675 +GEII RFEK G + K+ + R AE Y +PFF L+ ++T+GPV+ M+ EGE + R I+GAT+P ++APGTIR D A N +HGSD+ E+A+ EI +F Sbjct: 20 IGEIIARFEKAGLRIVAAKMKQLDRKDAEGFYAVHKGRPFFEDLVGFMTTGPVMIMVLEGENAINKNREIMGATDPKKAAPGTIRADFAQTIDENAVHGSDAAETAKTEIEYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_XANOR (Nucleoside diphosphate kinase OS=Xanthomonas oryzae pv. oryzae GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21 Identity = 53/119 (44.54%), Postives = 70/119 (58.82%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 15 VAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_XANOM (Nucleoside diphosphate kinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21 Identity = 53/119 (44.54%), Postives = 70/119 (58.82%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 15 VAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_XANCP (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21 Identity = 53/119 (44.54%), Postives = 70/119 (58.82%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 15 VAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_XANCB (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris (strain B100) GN=ndk PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21 Identity = 53/119 (44.54%), Postives = 70/119 (58.82%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 15 VAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133 The following BLAST results are available for this feature:
BLAST of CF835154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835154 ID=CF835154; Name=CF835154; organism=Citrus sinensis; type=EST; length=692bpback to top |