CF835154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PSEU2 (Nucleoside diphosphate kinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 50/119 (42.02%), Postives = 73/119 (61.34%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + ++GEI RFEK G + KL + + AE Y + S++ FFG L+ ++ SGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EI+ +F Sbjct: 15 VAKNVIGEITTRFEKAGLRVVASKLKQLSKAEAEGFYAEHSARGFFGDLVAFMISGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFADSIDANAVHGSDSEAAAAREISYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PSESM (Nucleoside diphosphate kinase OS=Pseudomonas syringae pv. tomato GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 50/119 (42.02%), Postives = 73/119 (61.34%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + ++GEI RFEK G + KL + + AE Y + S++ FFG L+ ++ SGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EI+ +F Sbjct: 15 VAKNVIGEITTRFEKAGLRVVASKLKQLSKAEAEGFYAEHSARGFFGDLVAFMISGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFADSIDANAVHGSDSEAAAAREISYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PSEPW (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain W619) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + ++G+I RFE+ G + K+ + + AE Y + S + FFG L+ ++TSGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EIA +F Sbjct: 15 VAKNVIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSERGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PSEPK (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain KT2440) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + ++G+I RFE+ G + K+ + + AE Y + S + FFG L+ ++TSGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EIA +F Sbjct: 15 VAKNVIGKITTRFEEAGLKIVASKMKQLSKAEAEGFYAEHSERGFFGDLVAFMTSGPVVVQVLEGENAIAKNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PSEP1 (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + ++G+I RFE+ G + K+ + + AE Y + S + FFG L+ ++TSGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EIA +F Sbjct: 15 VAKNVIGKITTRFEEAGLKIVASKMKQLSKAEAEGFYAEHSERGFFGDLVAFMTSGPVVVQVLEGENAIAKNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PSEF5 (Nucleoside diphosphate kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + ++G+I+ RFE+ G + K+ + + AE Y + S + FFG L+ ++TSGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EIA +F Sbjct: 15 VAKNVIGKIVSRFEEAGLRVVASKMKQLSKAEAEGFYAEHSERGFFGELVAFMTSGPVVVQVLEGENAIVRNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PSE14 (Nucleoside diphosphate kinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 50/119 (42.02%), Postives = 73/119 (61.34%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + ++GEI RFEK G + KL + + AE Y + S++ FFG L+ ++ SGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EI+ +F Sbjct: 15 VAKNVIGEITTRFEKAGLRVVASKLKQLSKAEAEGFYAEHSARGFFGDLVAFMISGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFADSIDANAVHGSDSEAAAAREISYFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PARDP (Nucleoside diphosphate kinase OS=Paracoccus denitrificans (strain Pd 1222) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 49/118 (41.53%), Postives = 73/118 (61.86%), Query Frame = -3 Query: 334 QRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 687 +R L G+I +FE+ G + K + + A + Y + +PF+G L E++TS PVV + EGEG + R ++GATNPA + GTIR + A+ G N +HGSDS E+A +EIA +F Sbjct: 16 KRNLTGKINAKFEEAGLRIVAQKRIQLTLAQAGQFYAEHKERPFYGELTEFMTSEPVVVQVLEGEGAILKNREVMGATNPANADEGTIRKEFALSVGENSVHGSDSPEAAAREIAFFF 133
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_CHLFF (Nucleoside diphosphate kinase OS=Chlamydophila felis (strain Fe/C-56) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 51/119 (42.86%), Postives = 74/119 (62.18%), Query Frame = -3 Query: 334 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 690 V + +GEI+ FEK GF + +K++ + AE Y S+PFF L++++ SGPVV M+ EG+ V R I+GATNP ++A GTIR G N +HGSDS+E+A EI+ +F Sbjct: 13 VGKAHIGEIVAIFEKAGFRIAAMKMVHLSAKEAEGFYAVHKSRPFFQELVDFMISGPVVVMVLEGDNAVVRNREIMGATNPQEAAQGTIRAQFGESIGINAVHGSDSLENAAIEISYFF 131
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_ACIAC (Nucleoside diphosphate kinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21 Identity = 46/120 (38.33%), Postives = 74/120 (61.67%), Query Frame = -3 Query: 331 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 690 V + ++G+I RFE G + ++ + R AE+ Y +PFF L++++ SGPV+ + EGE + R ++GAT+P ++APGTIR D A N +HGSD+ E+AQ E++ +FP Sbjct: 15 VAKNVIGQIYARFEAAGLKIAAARMAHLSRQEAEQFYAVHKERPFFKDLVDFMISGPVMIQVLEGENAILKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVSFFFP 134 The following BLAST results are available for this feature:
BLAST of CF835154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835154 ID=CF835154; Name=CF835154; organism=Citrus sinensis; type=EST; length=692bpback to top |