CF835154

Overview
NameCF835154
Unique NameCF835154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_YEAST (Nucleoside diphosphate kinase OS=Saccharomyces cerevisiae GN=YNK1 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.003e-37
Identity = 72/137 (52.55%), Postives = 99/137 (72.26%), Query Frame = -3
Query:  283 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 690
            VQRGLV +I+ RFEK+G+ L  +KL+       E+HY +   KPFF  ++ ++ SGP++A +WEG+ VV+ GRTI+GATNP  SAPGTIRGD  I  GRN+ HGSDSV+SA++EI LWF  +  ++W+S+   WIYE
Sbjct:   17 VQRGLVSQILSRFEKKGYKLVAIKLVKADDKLLEQHYAEHVGKPFFPKMVSFMKSGPILATVWEGKDVVRQGRTILGATNPLGSAPGTIRGDFGIDLGRNVCHGSDSVDSAEREINLWFKKEELVDWESNQAKWIYE 153          
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_DESRM (Nucleoside diphosphate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.003e-37
Identity = 73/137 (53.28%), Postives = 104/137 (75.91%), Query Frame = -3
Query:  283 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 690
            VQRGL+G+II +FE++G+ + GLK+M + R  AE+HY + + KPFF  L+++ITSGPVVAM+ EG+ VV T R ++GATNP ++APGTIR    +  GRNIIHGSDS+ESAQ+EI ++F  +  I++  ++  WIYE
Sbjct:   13 VQRGLIGQIISKFEQKGYKIVGLKMMQISREVAERHYGEHAGKPFFNGLVDFITSGPVVAMVIEGKDVVTTAREMMGATNPLKAAPGTIRATFGVDVGRNIIHGSDSLESAQREIGIFFKSEELIDYDRAIDTWIYE 149          
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37
Identity = 74/137 (54.01%), Postives = 96/137 (70.07%), Query Frame = -3
Query:  283 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 690
            VQRGL+ EI+ RFE +GF L GLK +T  +  AEKHY     +PFF  L+++ITSGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD  ++A  EI LWF +   ++W  S   W  E
Sbjct:   15 VQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAWRVE 151          
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_OCEIH (Nucleoside diphosphate kinase OS=Oceanobacillus iheyensis GN=ndk PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37
Identity = 72/136 (52.94%), Postives = 96/136 (70.59%), Query Frame = -3
Query:  286 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIY 690
            VQR L+GEI+ RFE +G+ L G KLM V    AE HY +   +PFFG L+++ITSGPV AM+WEGE V+ T R ++G TNP ++ P TIRGD  I  G+NIIHGSDS ESA++EI L+F +  I +++   + WIY
Sbjct:   13 VQRELIGEIVKRFETKGYKLAGAKLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGKTNPLEADPSTIRGDFGISVGKNIIHGSDSAESAEREITLFFTENEIVSYEKQANNWIY 148          
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK3_MOUSE (Nucleoside diphosphate kinase 3 OS=Mus musculus GN=Nme3 PE=2 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37
Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = -3
Query:  283 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 690
            VQR LVGEI+ RFE++GF L  LKL+        +HY +L  KPF+  L++Y++SGPVVAM+W+G  VV   R +IGAT+P  + PGTIRGD  +  G+N+IHGSDSVESA +EIALWF +   + W+ S   W+YE
Sbjct:   33 VQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYVELREKPFYSRLVKYMSSGPVVAMVWQGLDVVHASRALIGATDPGDAMPGTIRGDFCMEVGKNVIHGSDSVESAHREIALWFREAELLCWEDSAGHWLYE 169          
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.690e-37
Identity = 73/137 (53.28%), Postives = 96/137 (70.07%), Query Frame = -3
Query:  283 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 690
            VQRGL+ EI+ RFE +GF L GLK +T  +  AEKHY     +PFF  L+++ITSGPV+AM+WEGEGV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD  ++A  EI LWF +   ++W  S   W  E
Sbjct:   15 VQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVIAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAWRVE 151          
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.738e-37
Identity = 75/137 (54.74%), Postives = 96/137 (70.07%), Query Frame = -3
Query:  283 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 690
            VQRGLVGEI+ RFE++GF L GLK +T  R  A +HY     +PFF  L+++ITSGPV+AM+WEG+GV+ + R +IGAT P  + PGTIRGDLA+  GRN+IHGSD  ++AQ EI LWF    +N W  S   W  E
Sbjct:   15 VQRGLVGEILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSAEELNAWTPSDQSWRIE 151          
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.738e-37
Identity = 75/137 (54.74%), Postives = 96/137 (70.07%), Query Frame = -3
Query:  283 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 690
            VQRGLVGEI+ RFE++GF L GLK +   R  A +HY     +PFF  L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD  ++AQ EI LWF    +N W  S   W  E
Sbjct:   15 VQRGLVGEILGRFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSPEELNAWTPSDQSWRVE 151          
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.141e-36
Identity = 76/137 (55.47%), Postives = 94/137 (68.61%), Query Frame = -3
Query:  283 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 690
            VQRGLVGEI+ RFE++GF L GLK +   +  AEKHY     +PFF  L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDL I  GRN+IHGSD  E+A  EI LWF    + NW  S   W  E
Sbjct:   15 VQRGLVGEILGRFERKGFKLVGLKQLIPSKELAEKHYGVHKERPFFTGLVGFITSGPVVAMVWEGDGVILSARKLIGATKPLEAEPGTIRGDLGINIGRNVIHGSDGPETASFEIDLWFNSSELNNWNPSDQKWRVE 151          
BLAST of CF835154 vs. ExPASy Swiss-Prot
Match: NDK_STACT (Nucleoside diphosphate kinase OS=Staphylococcus carnosus (strain TM300) GN=ndk PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.542e-36
Identity = 75/137 (54.74%), Postives = 98/137 (71.53%), Query Frame = -3
Query:  283 VQRGLVGEIIIRFEKEGFSLKGLKLMTVVRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 690
            VQR LVGEII R EK+G  L G K MTV +  AE HY + + KPF+  L+ +ITS PV AM+ EGE VV+  R +IG TNP ++APGTIRGDL +  GRN+IHGSDSVESA++EI+LWF    ++ + ++   W+YE
Sbjct:   13 VQRKLVGEIITRLEKKGLKLVGGKFMTVSKEKAETHYGEHADKPFYEGLVSFITSAPVFAMVVEGENVVEVTRNMIGKTNPTEAAPGTIRGDLGLTVGRNVIHGSDSVESAKREISLWFEPNELSVYTANDEEWLYE 149          
The following BLAST results are available for this feature:
BLAST of CF835154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_YEAST3.003e-3752.55Nucleoside diphosphate kinase OS=Saccharomyces cer... [more]
NDK_DESRM3.003e-3753.28Nucleoside diphosphate kinase OS=Desulfotomaculum ... [more]
NDK_PROM15.122e-3754.01Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_OCEIH5.122e-3752.94Nucleoside diphosphate kinase OS=Oceanobacillus ih... [more]
NDK3_MOUSE5.122e-3752.55Nucleoside diphosphate kinase 3 OS=Mus musculus GN... [more]
NDK_PROMT6.690e-3753.28Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROMM8.738e-3754.74Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROM38.738e-3754.74Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROMA1.141e-3655.47Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_STACT2.542e-3654.74Nucleoside diphosphate kinase OS=Staphylococcus ca... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06M07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835154 ID=CF835154; Name=CF835154; organism=Citrus sinensis; type=EST; length=692bp
CCCCCCANGGTTTTTTTTTTTTTTTACATAAAAAGTGCAACCATCATGTG
CTAACCCTTATCAAACTCAATTCATAATACAGTCAACAAAAAAGCTTAAA
TATTGTATATGGCAACCACAAGAATGAAAGCAGCCAACATAACCAGAGAT
TGGTCTCAATTTAACTCAATACTTCATAACAGTTCACCAACAAGGAGTAA
CCATAAATAAGGAAATAGGGATAGGGATAGGGATAAGTCTAACTGCAGGA
ACAATTAGGCTCCTCAACCAAACATTAGTTTACTCATAGATCCAAGGGTG
AAGGCTGCTCTGCCAGTTAATAGGGCCATCAGGGAACCACAAGGCGATTT
CTTTCTGGGCACTCTCAACTGAGTCACTTCCATGGATGATATTCCTGCCC
GTCACGATAGCCAAATCACCACGGATGGTTCCAGGAGCAGACTGCGCAGG
GTTGGTGGCTCCAATAATAGTGCGGCCAGTCTTAACAACACCTTCACCCT
CCCAAATCATAGCAACAACAGGACCAGAGGTAATGTACTCAATCAGAGAA
CCAAAGAAAGGCTTCGATGACAAATCCTCATAGTGCTTCTCAGCAAAAGG
GCGGACCACAGTCATAAGCTTCAAACCCTTCAAGGAGAAACCCTCCTTCT
CAAATCTGATGATGATTTCACCAACAAGGCCTCTTTGGACCC
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