CF835155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK3_ARATH (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.908e-28 Identity = 55/97 (56.70%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 51 EMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 EME+TFI IKPDGVQRGL+ EII FE+KGF L G+K++ + FA KHY DL +PFF ++++SGPV+AM+ EG+GV+ GR +IGAT+P +S Sbjct: 87 EMERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFNGLCDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKS 183
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 3.908e-28 Identity = 58/100 (58.00%), Postives = 78/100 (78.00%), Query Frame = 3 Query: 42 NLKEMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 +++++E+T+IM+KPDG+QRGLVGEII FEKKGF L GLK+ + A++HY+DLS+K FF + IEYITSGPVV M EG GVV + R +IG T+P Q+ Sbjct: 79 SMEDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQA 178
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_MACCJ (Nucleoside diphosphate kinase OS=Macrococcus caseolyticus (strain JCSC5402) GN=ndk PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.705e-28 Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 ME+TF+MIKPDGV RGL+GEI+ E KG + G KLMTV A HY + S KPFFG +E+ITSGPV AM+ EG+ VV GRT++G TNPA+SA Sbjct: 1 MEKTFLMIKPDGVGRGLIGEIVKRIENKGIKVVGAKLMTVSEDLAKTHYGEHSEKPFFGELVEFITSGPVFAMVLEGDNVVEIGRTLVGKTNPAESA 97
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_CARHZ (Nucleoside diphosphate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=ndk PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.705e-28 Identity = 58/96 (60.42%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 ME+TFIM+KPDGVQRGLVGEII FEK+GF L GLKLM + R A+ HY + KPFF + +ITSGPVVAM+ EG+ V+ T R ++GATNP ++ Sbjct: 1 MERTFIMVKPDGVQRGLVGEIISRFEKRGFKLVGLKLMQISRELAETHYGEHKGKPFFEGLLNFITSGPVVAMVWEGKEVIATAREMMGATNPLKA 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_BACHD (Nucleoside diphosphate kinase OS=Bacillus halodurans GN=ndk PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.705e-28 Identity = 56/96 (58.33%), Postives = 74/96 (77.08%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 ME+T++MIKPDGVQR L+GEI+ FEKKGF+L G KLMTV + A+ HY + +PFFG +++ITSGPV AM+ EGE V+ T R ++GATNPA + Sbjct: 1 MERTYLMIKPDGVQRNLIGEIVSRFEKKGFTLIGAKLMTVTKEQAETHYAEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGATNPADA 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.705e-28 Identity = 59/100 (59.00%), Postives = 76/100 (76.00%), Query Frame = 3 Query: 42 NLKEMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 +L++++Q +IM+KPDGVQRGLVGEII FEKKGF L GLKL + A++HY+ L+ K FF IEYITSGPVV+M EG GVV + R +IGAT+P Q+ Sbjct: 78 SLEQVDQAYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAEEHYKHLNQKSFFPKLIEYITSGPVVSMAWEGVGVVPSARKLIGATDPLQA 177
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_NOSP7 (Nucleoside diphosphate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ndk PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.137e-27 Identity = 60/96 (62.50%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 ME+TF+ IKPDGVQRGLVGEII FE KGF+L GLK + V + A++HY +PFFGS +E+ITS PVVAM+ EG+GVV + R IIGATNP S Sbjct: 1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLKVSKELAEQHYGVHRERPFFGSLVEFITSSPVVAMVWEGDGVVASARKIIGATNPLTS 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_HELMI (Nucleoside diphosphate kinase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=ndk PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.137e-27 Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 ME+T++MIKPDGVQRGLVGEII FEKKGF L G+K + + R A+KHY + KPFF ++YI SGPVVAM EG+ +V+ R ++GATNPA++A Sbjct: 1 MERTYLMIKPDGVQRGLVGEIISRFEKKGFKLVGMKFLRLTREMAEKHYAEHVGKPFFAGLVDYIISGPVVAMCWEGKDIVSVSREMMGATNPAKAA 97
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_CYAP4 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ndk PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.137e-27 Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 ME+TF+ +KPDGVQR LVGEII FE KGF L GLKLM V + A++HY + KPFF +++ITSGPVVAM+ EG+GVV + R IIGATNP S Sbjct: 1 MERTFLAVKPDGVQRALVGEIIRRFEAKGFKLVGLKLMNVSKDLAEQHYGEHKEKPFFPGLVQFITSGPVVAMVWEGKGVVASARKIIGATNPLNS 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK4_SPIOL (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea GN=NDK4 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.137e-27 Identity = 55/97 (56.70%), Postives = 73/97 (75.26%), Query Frame = 3 Query: 51 EMEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 E E+TFI IKPDGVQRGL+ EI+ FE+KGF L +K++ + FA KHY DLS +PFF ++++SGPVVAM+ EGEGV+ GR +IGAT+P +S Sbjct: 84 EFERTFIAIKPDGVQRGLISEIVARFERKGFKLVAIKVVIPSKDFAQKHYHDLSERPFFNGLCDFLSSGPVVAMVWEGEGVIKYGRKLIGATDPQKS 180 The following BLAST results are available for this feature:
BLAST of CF835155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835155 ID=CF835155; Name=CF835155; organism=Citrus sinensis; type=EST; length=346bpback to top |