CF835155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_HAEIG (Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain PittGG) GN=ndk PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.451e-15 Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNP 332 E+TF +IKPD V+R L+G I+ FE+ GF + K++ + R A+ Y + K FF +EY+ S P+V + E E V RT+IG TNP Sbjct: 3 ERTFSIIKPDAVKRNLIGAILTRFEQNGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPLVEYMMSSPIVVSVLEKENAVKDYRTLIGTTNP 94
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_HAEIE (Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain PittEE) GN=ndk PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.451e-15 Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNP 332 E+TF +IKPD V+R L+G I+ FE+ GF + K++ + R A+ Y + K FF +EY+ S P+V + E E V RT+IG TNP Sbjct: 3 ERTFSIIKPDAVKRNLIGAILTRFEQNGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPLVEYMMSSPIVVSVLEKENAVKDYRTLIGTTNP 94
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_GEOLS (Nucleoside diphosphate kinase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=ndk PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.451e-15 Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 ME+TF +IKPD V+RGL G+II E+ GF++ G+K + + R A+ Y +PFF +++ PV+ M + E + RT++GATNPA + Sbjct: 1 MERTFAIIKPDAVERGLSGKIITKIEEAGFAIVGMKKIHLSRAQAEGFYYVHKERPFFNDLCSFMSRSPVIVMCLQKENAIADWRTLMGATNPANA 96
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_ENTS8 (Nucleoside diphosphate kinase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ndk PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.451e-15 Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 +E+TF +IKP+ V + ++G I FE GF + G K++ + A Y + KPFF +E++TSGP+V + E E V R ++GATNPA + Sbjct: 3 IERTFSIIKPNAVAKNVIGSIFARFESAGFKIIGTKMLHLTVEQARGFYAEHEGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANA 98
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_DESDG (Nucleoside diphosphate kinase OS=Desulfovibrio desulfuricans (strain G20) GN=ndk PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.451e-15 Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 E+TF +IKPD +R L G I+ ++ G + +K M + R A+ Y +PFF S +++TSGP+VAM+ EG+ V R ++GATNP +A Sbjct: 3 ERTFAIIKPDATRRNLEGPILSVIQQNGLRVVAMKKMRLTREQAEGFYHVHKERPFFASLTDFMTSGPIVAMVLEGDNAVARWRELMGATNPENAA 98
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_DESDA (Nucleoside diphosphate kinase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=ndk PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.451e-15 Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 M+ TF +IKPD V R L GEI+ E G + LK + + + A Y +PFF S +Y++SGPVV ++ GE V R ++GATNPAQ+ Sbjct: 2 MQSTFAIIKPDAVSRQLTGEILAAMEASGLKIVALKRLHLSKAQAAGFYAVHRERPFFDSLTDYMSSGPVVCVVLRGEDAVPRWRALMGATNPAQA 97
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_CITK8 (Nucleoside diphosphate kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ndk PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.451e-15 Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 +E+TF +IKP+ V + ++G I FE GF + G K++ + A Y + KPFF +E++TSGP+V + E E V R ++GATNPA + Sbjct: 3 IERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANA 98
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK1_PARUW (Nucleoside diphosphate kinase 1 OS=Protochlamydia amoebophila (strain UWE25) GN=ndk1 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.451e-15 Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 3 Query: 57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341 EQT +IKPD VQ +GEII FE+ G + +K+ T+ + A K Y +PF+ + +++SGPVV M+ EG + R ++GAT+P ++ Sbjct: 4 EQTLSIIKPDAVQNNYIGEIISRFEQAGLKIAAIKMTTLTKDQASKFYAIHKDRPFYNDLVNFMSSGPVVVMVLEGNQAIAKNRELMGATDPKKA 98
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_PSEPW (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain W619) GN=ndk PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 35/97 (36.08%), Postives = 60/97 (61.86%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +++TF +IKPD V + ++G+I FE+ G + K+ + + A+ Y + S + FFG + ++TSGPVV + EGE + R ++GATNP ++A Sbjct: 3 VQRTFSIIKPDAVAKNVIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSERGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAA 99
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_PSEPK (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain KT2440) GN=ndk PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 35/97 (36.08%), Postives = 60/97 (61.86%), Query Frame = 3 Query: 54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344 +++TF +IKPD V + ++G+I FE+ G + K+ + + A+ Y + S + FFG + ++TSGPVV + EGE + R ++GATNP ++A Sbjct: 3 VQRTFSIIKPDAVAKNVIGKITTRFEEAGLKIVASKMKQLSKAEAEGFYAEHSERGFFGDLVAFMTSGPVVVQVLEGENAIAKNRELMGATNPKEAA 99 The following BLAST results are available for this feature:
BLAST of CF835155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835155 ID=CF835155; Name=CF835155; organism=Citrus sinensis; type=EST; length=346bpback to top |