CF835156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_LISMO (Nucleoside diphosphate kinase OS=Listeria monocytogenes GN=ndk PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.051e-38 Identity = 77/140 (55.00%), Postives = 100/140 (71.43%), Query Frame = -1 Query: 276 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 692 +KPDGV+RGL+GEI+ R EKKG + KLM +DR AEKHY + K FF LI +ITSGPV AM+ EG+ + T R ++G TNP ++ PGTIR D AI T RN+IHGSDS ESAQ+EI L+F PD +++Q ++ WI Sbjct: 8 VKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI 147
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_EXIS2 (Nucleoside diphosphate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=ndk PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.761e-37 Identity = 71/130 (54.62%), Postives = 94/130 (72.31%), Query Frame = -1 Query: 303 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN 692 +KPDGV+RGL+GEII R E+KGF ++ +K+M V A+ HY + + KPFFG L+ ++TSGPVVA+ EGE VV R +IG T P ++ PGTIRGD A N+IHGSDSVESA++E+ LWF P+N Sbjct: 8 VKPDGVERGLIGEIIARIERKGFVIREMKMMQVTEELAQAHYAEHAEKPFFGELVTFLTSGPVVALRVEGEDVVTVSRMMIGKTKPTEALPGTIRGDFANTMSENVIHGSDSVESAERELGLWFQGQPLN 137
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_LISIN (Nucleoside diphosphate kinase OS=Listeria innocua GN=ndk PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.299e-37 Identity = 75/140 (53.57%), Postives = 102/140 (72.86%), Query Frame = -1 Query: 276 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 692 +KPDGV+RGL+GEI+ + EKKG L KLM +DR AE+HY + KPFF LI +ITSGPV AM+ EG+ V+KT R ++G TNP ++ PGTIR + AI T RN+IHGSDS ESA++EI L+F P ++++ ++ WI Sbjct: 8 VKPDGVERGLIGEIVAKIEKKGIKLVAGKLMQIDRTLAEQHYAEHIGKPFFEDLIGFITSGPVFAMVLEGDDVIKTARRMMGKTNPLEADPGTIRAEYAIHTNRNVIHGSDSPESAKREIQLFFEPHEILSYEKAVDTWI 147
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_LISMH (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=ndk PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.003e-37 Identity = 75/140 (53.57%), Postives = 100/140 (71.43%), Query Frame = -1 Query: 276 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 692 +KPDGV+RGL+GEI+ R EKKG + KLM +DR AEKHY + K FF LI +ITSGPV AM+ EG+ + T R ++G TNP ++ PGTIR D AI T RN+IHGSDS+ESA++EI L+F P +++Q ++ WI Sbjct: 8 VKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSLESAKREIQLFFAPQEILSYQKAIDTWI 147
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_DESHY (Nucleoside diphosphate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=ndk PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37 Identity = 75/142 (52.82%), Postives = 101/142 (71.13%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 692 +KPD VQRGLVG+II RFE KG L G+KLM+VD+ AE+HY + K FF ++YI S PVVAM+WEG+ VV R ++GATNPA + PG+IRG + RN+IHGSDSV SA++EIAL+F P+ +++ + W+ E Sbjct: 8 LKPDAVQRGLVGQIIARFETKGCKLVGMKLMSVDQALAEQHYAEHKGKSFFEPTVQYIMSSPVVAMVWEGKNVVALARELMGATNPANANPGSIRGSFGMDISRNVIHGSDSVASAEREIALYFRPEELCDYRKAGEEWLSE 149
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_DESHD (Nucleoside diphosphate kinase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=ndk PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37 Identity = 75/142 (52.82%), Postives = 101/142 (71.13%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 692 +KPD VQRGLVG+II RFE KG L G+KLM+VD+ AE+HY + K FF ++YI S PVVAM+WEG+ VV R ++GATNPA + PG+IRG + RN+IHGSDSV SA++EIAL+F P+ +++ + W+ E Sbjct: 8 LKPDAVQRGLVGQIIARFEAKGCKLVGMKLMSVDQALAEQHYAEHKGKSFFEPTVQYIMSSPVVAMVWEGKNVVALARELMGATNPANANPGSIRGSFGMDISRNVIHGSDSVASAEREIALYFRPEELCDYRKAGEEWLSE 149
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_METKA (Nucleoside diphosphate kinase OS=Methanopyrus kandleri GN=ndk PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.690e-37 Identity = 78/143 (54.55%), Postives = 100/143 (69.93%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD--GPINWQSSLHPWIYE 692 IKPDGV RGLVGE+I R E+KG + L++ +DR AEK YE+ KPFF LIEY+TSGPVV MI EG VK R IIGAT+PA++APGT+RGD A+ GRN++H SDS ESA++EI + F I+++ W+YE Sbjct: 11 IKPDGVVRGLVGEVIRRLERKGLKIVALEMRQLDRETAEKLYEEHRDKPFFEDLIEYVTSGPVVVMIVEGRKAVKVVRNIIGATDPAEAAPGTVRGDFALDIGRNVVHASDSPESAEREIEIVFGKDLSTIDYERCDEEWLYE 153
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_LISMF (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=ndk PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.690e-37 Identity = 75/140 (53.57%), Postives = 99/140 (70.71%), Query Frame = -1 Query: 276 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 692 +KPDGV+RGL+GEI+ R EKKG + KLM +DR AEKHY + K FF LI +ITSGPV AM+ EG+ + T R ++G TNP ++ PGTIR D AI T RN+IHGSDS ESA++EI L+F P +++Q ++ WI Sbjct: 8 VKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAKREIQLFFAPQEILSYQKAIDTWI 147
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_LISMC (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=ndk PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.738e-37 Identity = 74/140 (52.86%), Postives = 99/140 (70.71%), Query Frame = -1 Query: 276 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 692 +KPDGV+RGL+GEI+ R EKKG + KLM +DR AEKHY + K FF LI +ITSGPV AM+ EG+ + T R ++G TNP ++ PGTIR D A+ T RN+IHGSDS ESA++EI L+F P +++Q ++ WI Sbjct: 8 VKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAVHTNRNVIHGSDSPESAKREIQLFFAPQEILSYQKAIDTWI 147
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDKM_MOUSE (Nucleoside diphosphate kinase, mitochondrial OS=Mus musculus GN=Nme4 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.738e-37 Identity = 71/137 (51.82%), Postives = 94/137 (68.61%), Query Frame = -1 Query: 285 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLH 692 +KPDGVQR LVG +I RFE++GF L G+K++ +HY DL KPF+ +LI Y++SGPVVAM+WEG VV R +IG T+ ++APGTIRGD ++ RN+IH SDSV+ AQ+EI LWF +NW H Sbjct: 43 VKPDGVQRRLVGTVIQRFERRGFKLVGMKMLQAPESILAEHYRDLQRKPFYPALISYMSSGPVVAMVWEGPNVVHISRAMIGHTDSTEAAPGTIRGDFSVHISRNVIHASDSVDGAQREIELWFQSSELLNWADGGH 179 The following BLAST results are available for this feature:
BLAST of CF835156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835156 ID=CF835156; Name=CF835156; organism=Citrus sinensis; type=EST; length=692bpback to top |