CF835156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK4_ARATH (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDK4 PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 9.314e-47 Identity = 85/141 (60.28%), Postives = 111/141 (78.72%), Query Frame = -1 Query: 273 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 692 IKPDGVQRGL+ EII RFE+KG+ L G+K+M + FA+KHY DL +PFF L +++SGPVVAM+WEGEGV++ GR +IGAT+P +S PGTIRGDLA+V GRNIIHGSD E+A+ EI+LWF P+ +++ S+ WIY Sbjct: 94 IKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNGLCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISLWFKPEELVSYTSNAEKWIY 234
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.314e-47 Identity = 90/142 (63.38%), Postives = 107/142 (75.35%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 692 +KPDGVQRGLVGEII RFEKKGF L GLKL + AE+HY+ L+ K FF LIEYITSGPVV+M WEG GVV + R +IGAT+P Q+ PGTIRGD A+ TGRNIIHGSDS E+ ++EIALWF +G + W PW+ E Sbjct: 89 VKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAEEHYKHLNQKSFFPKLIEYITSGPVVSMAWEGVGVVPSARKLIGATDPLQAEPGTIRGDFAVQTGRNIIHGSDSPENGEREIALWFKEGELCEWTPVQEPWLRE 230
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_TRIEI (Nucleoside diphosphate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=ndk PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.216e-46 Identity = 90/142 (63.38%), Postives = 110/142 (77.46%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 692 IKPDGVQRGLVG+II RFE KGF+L GLK+MTV + AEKHY+ +PFF SLIE+I SGP+VAM+WEGEGVV + R IIGATNP + PGTIRGD I GRN+IHGSD++E+AQ EI LWF + ++W+ +L WI E Sbjct: 8 IKPDGVQRGLVGQIISRFETKGFTLVGLKIMTVTKELAEKHYDVHKERPFFSSLIEFIKSGPLVAMVWEGEGVVASARKIIGATNPLTAEPGTIRGDYGISLGRNLIHGSDAIETAQTEINLWFKEEELVSWKPTLTSWIVE 149
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDKB_RAT (Nucleoside diphosphate kinase B OS=Rattus norvegicus GN=Nme2 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.216e-46 Identity = 89/142 (62.68%), Postives = 107/142 (75.35%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 692 IKPDGVQRGLVGEII RFE+KGF L +K + ++HY DL +PFF L++Y+ SGPVVAM+WEG VVKTGR ++G TNPA S PGTIRGD I GRNIIHGSDSVESA+KEI LWF P+ I+++S H W+YE Sbjct: 11 IKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFKPEELIDYKSCAHDWVYE 152
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDKA_RAT (Nucleoside diphosphate kinase A OS=Rattus norvegicus GN=Nme1 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.216e-46 Identity = 90/142 (63.38%), Postives = 108/142 (76.06%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 692 IKPDGVQRGLVGEII RFE+KGF L GLK + ++HY DL +PFF L++Y+ SGPVVAM+WEG VVKTGR ++G TNPA S PGTIRGD I GRNIIHGSDSVESA+KEI+LWF P+ ++++S WIYE Sbjct: 11 IKPDGVQRGLVGEIIKRFEQKGFRLVGLKFIQASEDLLKEHYIDLKDRPFFSGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEISLWFQPEELVDYKSCAQNWIYE 152
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK4_SPIOL (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea GN=NDK4 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.216e-46 Identity = 85/141 (60.28%), Postives = 110/141 (78.01%), Query Frame = -1 Query: 273 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 692 IKPDGVQRGL+ EI+ RFE+KGF L +K++ + FA+KHY DLS +PFF L ++++SGPVVAM+WEGEGV+K GR +IGAT+P +S PGTIRGDLA+V GRNIIHGSD E+A+ EI LWF P+ +N+ + WIY Sbjct: 92 IKPDGVQRGLISEIVARFERKGFKLVAIKVVIPSKDFAQKHYHDLSERPFFNGLCDFLSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVNYTHNAEKWIY 232
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_COLLI (Nucleoside diphosphate kinase OS=Columba livia PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 2.075e-46 Identity = 90/142 (63.38%), Postives = 107/142 (75.35%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 692 IKPDGVQRGLVGEII RFE+KGF L G+K + ++HY DL +PF+ L++Y+ SGP+VAM+WEG VVKTGR ++G TNPA S PGTIRGD I GRNIIHGSDSVESAQKEI LWF P I+++S H WIYE Sbjct: 12 IKPDGVQRGLVGEIIKRFEQKGFRLVGMKFVHASEELLKQHYIDLKDRPFYPGLVKYMNSGPIVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAQKEINLWFKPAELIDFKSCAHDWIYE 153
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDKB_MOUSE (Nucleoside diphosphate kinase B OS=Mus musculus GN=Nme2 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.075e-46 Identity = 89/142 (62.68%), Postives = 107/142 (75.35%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 692 IKPDGVQRGLVGEII RFE+KGF L +K + ++HY DL +PFF L++Y+ SGPVVAM+WEG VVKTGR ++G TNPA S PGTIRGD I GRNIIHGSDSVESA+KEI LWF P+ I+++S H W+YE Sbjct: 11 IKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIHLWFKPEELIDYKSCAHDWVYE 152
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDKA_DROYA (Nucleoside diphosphate kinase (Fragment) OS=Drosophila yakuba GN=awd PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.075e-46 Identity = 89/142 (62.68%), Postives = 105/142 (73.94%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 692 +KPDGVQRGLVG+II RFE+KGF L LK + EKHY DLS++PFF L+ Y+ SGPVV M+WEG VVKTGR ++GATNPA S PGTIRGD I GRNIIHGSD+VESA+KEIALWF + + W + WIYE Sbjct: 9 VKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 150
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDKA_DROME (Nucleoside diphosphate kinase OS=Drosophila melanogaster GN=awd PE=1 SV=3) HSP 1 Score: 185.652 bits (470), Expect = 2.075e-46 Identity = 89/142 (62.68%), Postives = 105/142 (73.94%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 692 +KPDGVQRGLVG+II RFE+KGF L LK + EKHY DLS++PFF L+ Y+ SGPVV M+WEG VVKTGR ++GATNPA S PGTIRGD I GRNIIHGSD+VESA+KEIALWF + + W + WIYE Sbjct: 12 VKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 153 The following BLAST results are available for this feature:
BLAST of CF835156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835156 ID=CF835156; Name=CF835156; organism=Citrus sinensis; type=EST; length=692bpback to top |