CF835156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_ECO45 (Nucleoside diphosphate kinase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=ndk PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKP+ V + ++G I RFE GF + G K++ + A Y + KPFF L+E++TSGP+V + EGE V+ R ++GATNPA + GT+R D A N HGSDSVESA +EIA +F +G + Sbjct: 10 IKPNAVAKNVIGSIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSVESAAREIAYFFGEGEV 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_ECO27 (Nucleoside diphosphate kinase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ndk PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKP+ V + ++G I RFE GF + G K++ + A Y + KPFF L+E++TSGP+V + EGE V+ R ++GATNPA + GT+R D A N HGSDSVESA +EIA +F +G + Sbjct: 10 IKPNAVAKNVIGSIFARFETAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSVESAAREIAYFFGEGEV 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_ECO24 (Nucleoside diphosphate kinase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ndk PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKP+ V + ++G I RFE GF + G K++ + A Y + KPFF L+E++TSGP+V + EGE V+ R ++GATNPA + GT+R D A N HGSDSVESA +EIA +F +G + Sbjct: 10 IKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSVESAAREIAYFFGEGEV 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_ALTMD (Nucleoside diphosphate kinase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=ndk PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 56/129 (43.41%), Postives = 81/129 (62.79%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKPD V + ++G I RFE G + K++ + + AE Y + +PFFG+L++++TSGPV+ + EGE V R I+GATNPA +A GT+R D A N +HGSD+ ESA +EIA +F + I Sbjct: 10 IKPDAVAKNVIGAIYNRFESAGLRIVASKMIHMSKEQAEGFYAEHKERPFFGALVDFMTSGPVMVQVLEGENAVLANREIMGATNPADAASGTLRSDYAASIDENAVHGSDAPESAAREIAYFFSEEEI 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_SHEAM (Nucleoside diphosphate kinase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25 Identity = 55/124 (44.35%), Postives = 80/124 (64.52%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + +G I RFE G + K++ + + AE Y + S +PFFG+L+ ++TSGP++ + EGE V R I+GATNPAQ+A GT+R D A N +HGSD++ SA++EIA +F Sbjct: 10 IKPDAVAKNHIGAIYNRFESAGLKIIAAKMVHLTKEQAEGFYAEHSERPFFGALVSFMTSGPIMVQVLEGENAVLANREIMGATNPAQAARGTLRADYAASIDENAVHGSDALASAEREIAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_METPB (Nucleoside diphosphate kinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25 Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 +KPD +R + G + E G + G + + + R AEK YE +PFFG L+E++TSGPVV + EGE V R ++GATNPAQ+A GTIR A G N +HGSDS ++A+ EIA +F D I Sbjct: 10 LKPDATRRNITGAVNAVIEAAGLRIVGQRRIRMTRAQAEKFYEVHKERPFFGELVEFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAADGTIRKQFAESVGENTVHGSDSADNAKIEIAQFFTDADI 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_METC4 (Nucleoside diphosphate kinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25 Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 +KPD +R + G + E G + G + + + R AEK YE +PFFG L+E++TSGPVV + EGE V R ++GATNPAQ+A GTIR A G N +HGSDS ++A+ EIA +F D I Sbjct: 10 LKPDATRRNITGAVNAVIEAAGLRIVGQRRIRMTREQAEKFYEVHKERPFFGELVEFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAADGTIRKQFAESVGENTVHGSDSADNARLEIAQFFNDADI 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_CAMHC (Nucleoside diphosphate kinase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25 Identity = 56/124 (45.16%), Postives = 80/124 (64.52%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V++G++G+II RFE G + K + + + A + Y + FF L++Y+TSGPVV M+ EGE V R ++GAT+P ++APGTIR D A N +HGSDS E+A+ EIA +F Sbjct: 8 IKPDAVEKGVIGKIIDRFESAGLRIAAAKKIKLSKCDASQFYAIHKERSFFNDLVDYMTSGPVVVMVLEGENAVAKNRELMGATDPKKAAPGTIRADFAESIDANAVHGSDSEENAKNEIAFFF 131
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_ANAMM (Nucleoside diphosphate kinase OS=Anaplasma marginale (strain St. Maries) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25 Identity = 56/129 (43.41%), Postives = 83/129 (64.34%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 +KPD V+RG++G ++ E G + ++ + AE Y ++PFF SL+ ++TSGPVV + GE VKT R ++GATNP+++APGTIRGDLA N +HGSDS+E+A+ EI +F + I Sbjct: 10 LKPDVVERGIIGRVLSYIEAAGLRIVAQRMCALSHEQAEAFYAVHKARPFFPSLVGFMTSGPVVVQVLVGESAVKTYRDVMGATNPSEAAPGTIRGDLAESIDANCVHGSDSLENAEWEIKFFFKEHEI 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_ANAMF (Nucleoside diphosphate kinase OS=Anaplasma marginale (strain Florida) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25 Identity = 56/129 (43.41%), Postives = 83/129 (64.34%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 +KPD V+RG++G ++ E G + ++ + AE Y ++PFF SL+ ++TSGPVV + GE VKT R ++GATNP+++APGTIRGDLA N +HGSDS+E+A+ EI +F + I Sbjct: 10 LKPDVVERGIIGRVLSYIEAAGLRIVAQRMCALSHEQAEAFYAVHKARPFFPSLVGFMTSGPVVVQVLVGESAVKTYRDVMGATNPSEAAPGTIRGDLAESIDANCVHGSDSLENAEWEIKFFFKEHEI 138 The following BLAST results are available for this feature:
BLAST of CF835156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835156 ID=CF835156; Name=CF835156; organism=Citrus sinensis; type=EST; length=692bpback to top |