CF835156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_SALEP (Nucleoside diphosphate kinase OS=Salmonella enteritidis PT4 (strain P125109) GN=ndk PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25 Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKP+ V + ++G I RFE GF + G K++ + A Y + KPFF L+E++TSGP+V + E E V+ R ++GATNPA + GT+R D A N HGSDS+ESAQ+EIA +F +G + Sbjct: 10 IKPNAVAKNVIGSIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSLESAQREIAFFFGEGEV 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_SALDC (Nucleoside diphosphate kinase OS=Salmonella dublin (strain CT_02021853) GN=ndk PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25 Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKP+ V + ++G I RFE GF + G K++ + A Y + KPFF L+E++TSGP+V + E E V+ R ++GATNPA + GT+R D A N HGSDS+ESAQ+EIA +F +G + Sbjct: 10 IKPNAVAKNVIGSIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSLESAQREIAFFFGEGEV 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_SALA4 (Nucleoside diphosphate kinase OS=Salmonella agona (strain SL483) GN=ndk PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25 Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKP+ V + ++G I RFE GF + G K++ + A Y + KPFF L+E++TSGP+V + E E V+ R ++GATNPA + GT+R D A N HGSDS+ESAQ+EIA +F +G + Sbjct: 10 IKPNAVAKNVIGSIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSLESAQREIAFFFGEGEV 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_PSYWF (Nucleoside diphosphate kinase OS=Psychrobacter sp. (strain PRwf-1) GN=ndk PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25 Identity = 57/129 (44.19%), Postives = 79/129 (61.24%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKPD V +G I RFE+ G + G K++ +D A Y + +PF+ L+ ++TSGPVV + EGE + R I+GATNPA++A GTIR D A N +HGSDS ESA++EIA +F D + Sbjct: 10 IKPDAVGGNHIGAIYSRFEEAGLKIVGAKMLHLDDEKAGGFYAEHKERPFYNDLVSFMTSGPVVVSVLEGENAIAKHREIMGATNPAEAAEGTIRKDFASSIDENAVHGSDSAESAKREIAYFFSDNEV 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_PARD8 (Nucleoside diphosphate kinase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ndk PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25 Identity = 56/129 (43.41%), Postives = 79/129 (61.24%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 +KP VQRGL+GEI+ RFEKKG L G+K++ + +HY L KPFF + + ++ PV+ WEG + RT+ G TN +APGTIRGD ++ NI+H SDS E+A+ E+ +F D I Sbjct: 8 LKPCTVQRGLIGEIVTRFEKKGLRLAGMKMVWLTDEILSEHYAHLKEKPFFQRIKDAMSVCPVIVCCWEGVDAIHVVRTLAGTTNGRNAAPGTIRGDYSMSVQENIVHASDSPETAEIELKRFFKDDEI 136
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_COXBU (Nucleoside diphosphate kinase OS=Coxiella burnetii GN=ndk PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25 Identity = 56/131 (42.75%), Postives = 81/131 (61.83%), Query Frame = -1 Query: 303 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPIN 692 IKPD V + ++G+I RFEK G + K+ + +P AEK Y +PF+ L++++T GPV+ + EGE + R I+GATNP ++ PGTIR D A N +HGSD E+A++EIA +F PD N Sbjct: 10 IKPDAVAKNVIGQIYSRFEKAGLKIIAAKMCHLSKPQAEKFYAVHKDRPFYPDLVKFMTQGPVMIQVLEGENAIVKNREIMGATNPKEALPGTIRADFADSIDANAVHGSDGPETAKEEIAFFFKPDESFN 140
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_COXBR (Nucleoside diphosphate kinase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=ndk PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25 Identity = 56/131 (42.75%), Postives = 81/131 (61.83%), Query Frame = -1 Query: 303 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPIN 692 IKPD V + ++G+I RFEK G + K+ + +P AEK Y +PF+ L++++T GPV+ + EGE + R I+GATNP ++ PGTIR D A N +HGSD E+A++EIA +F PD N Sbjct: 10 IKPDAVAKNVIGQIYSRFEKAGLKIIAAKMCHLSKPQAEKFYAVHKDRPFYPDLVKFMTQGPVMIQVLEGENAIVKNREIMGATNPKEALPGTIRADFADSIDANAVHGSDGPETAKEEIAFFFKPDESFN 140
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_COXB2 (Nucleoside diphosphate kinase OS=Coxiella burnetii (strain CbuG_Q212) GN=ndk PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25 Identity = 56/131 (42.75%), Postives = 81/131 (61.83%), Query Frame = -1 Query: 303 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPIN 692 IKPD V + ++G+I RFEK G + K+ + +P AEK Y +PF+ L++++T GPV+ + EGE + R I+GATNP ++ PGTIR D A N +HGSD E+A++EIA +F PD N Sbjct: 10 IKPDAVAKNVIGQIYSRFEKAGLKIIAAKMCHLSKPQAEKFYAVHKDRPFYPDLVKFMTQGPVMIQVLEGENAIVKNREIMGATNPKEALPGTIRADFADSIDANAVHGSDGPETAKEEIAFFFKPDESFN 140
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_PSEHT (Nucleoside diphosphate kinase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=ndk PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25 Identity = 56/126 (44.44%), Postives = 79/126 (62.70%), Query Frame = -1 Query: 315 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 692 +KPD V + +G I RFE G + K++ + + AE Y + S +PFFG+L+ ++TSGPV+ + EGE V R I+GATNPA + GT+R D A N +HGSD+VESA +EIA +F D Sbjct: 10 VKPDAVAKNHIGAIYNRFETAGLKIVAAKMVHLSQEKAEGFYAEHSERPFFGALVSFMTSGPVMVTVLEGENAVLKNREIMGATNPADALAGTLRADYADSIDENAVHGSDAVESAAREIAYFFAD 135
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_METRJ (Nucleoside diphosphate kinase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=ndk PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25 Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 +KPD +R L G + E+ G + G + + + + AEK YE +PFFG L+ ++TSGPVV + EGE V R ++GATNPAQ+A GTIR A G N +HGSDS E+A+ EIA +F D I Sbjct: 10 LKPDATRRNLTGAVNAVIEEAGLRIVGQRRIRMTKEQAEKFYEVHKERPFFGELVTFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAAEGTIRKKFAESVGENTVHGSDSAENAKLEIAQFFKDSDI 138 The following BLAST results are available for this feature:
BLAST of CF835156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835156 ID=CF835156; Name=CF835156; organism=Citrus sinensis; type=EST; length=692bpback to top |