CF835156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_VIBSL (Nucleoside diphosphate kinase OS=Vibrio splendidus (strain LGP32) GN=ndk PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25 Identity = 57/129 (44.19%), Postives = 79/129 (61.24%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 +KPD V+R LVGEI R EK G + K++++ A Y + K FFG L E++TSGP++ + EGE + R ++G TNP ++A GTIR D AI N +HGSDS ESA +EI +FP+ I Sbjct: 10 VKPDAVKRNLVGEIYHRIEKAGLQIIAAKMVSLTEAQASGFYAEHEGKEFFGPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTIRADYAISMRYNSVHGSDSPESAAREIEFFFPESEI 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_PSEU5 (Nucleoside diphosphate kinase OS=Pseudomonas stutzeri (strain A1501) GN=ndk PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25 Identity = 55/124 (44.35%), Postives = 77/124 (62.10%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI RFEK G + K++ + A Y + S + FF L+ ++TSGPV+ + EGE V R ++GATNP ++APGTIR D A+ N +HGSDS SA +EIA +F Sbjct: 10 IKPDAVAKNVIGEITTRFEKAGLRVVASKMVQLSEREAAGFYAEHSERGFFKDLVAFMTSGPVIVQVLEGENAVAKNRELMGATNPKEAAPGTIRADFAVSIDENAVHGSDSEASAAREIAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_PSEE4 (Nucleoside diphosphate kinase OS=Pseudomonas entomophila (strain L48) GN=ndk PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25 Identity = 54/124 (43.55%), Postives = 79/124 (63.71%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++G+I RFE+ G + K+ + + AE Y + S++ FFG L+ ++TSGPVV + EGE + R ++GATNP ++APGTIR D A N +HGSDS +A +EIA +F Sbjct: 10 IKPDAVAKNVIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSARGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAAPGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_CAMJE (Nucleoside diphosphate kinase OS=Campylobacter jejuni GN=ndk PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25 Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKPD V++G++G+I+ RFE G + +K + + + AE Y +PFF L+E++ SGPVV I EGEG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EI +F I Sbjct: 8 IKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSILEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVHGSDSLENAKIEIEFFFKPNEI 136
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_BORA1 (Nucleoside diphosphate kinase OS=Bordetella avium (strain 197N) GN=ndk PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25 Identity = 51/126 (40.48%), Postives = 80/126 (63.49%), Query Frame = -1 Query: 315 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 692 IKPD V + ++G+I+ RFE+ G + +L + R AE+ Y +PFF L++++ SGPV + EGE ++ R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 10 IKPDAVAKNVIGQIVARFEQAGLKVIAARLQQLSRADAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGENAIQVNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_SALAR (Nucleoside diphosphate kinase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ndk PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24 Identity = 55/129 (42.64%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKP+ V + ++G I RFE GF + G +++ + A Y + KPFF L+E++TSGP+V + E E V+ R ++GATNPA + GT+R D A N HGSDS+ESAQ+EIA +F +G + Sbjct: 10 IKPNAVAKNVIGSIFARFEAAGFRIVGTRMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSFTENGTHGSDSLESAQREIAFFFGEGEV 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_PROMH (Nucleoside diphosphate kinase OS=Proteus mirabilis (strain HI4320) GN=ndk PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24 Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKP+ V++ ++G I RFE GFS+ K++ + R AE YE+ +PFF L+E++TSGP++ + EGE ++ R ++GATNP + GT+R D A N +HGSDS SA +EIA +F + I Sbjct: 10 IKPNAVKKNVIGAIYNRFESAGFSIVAAKMLHLTREQAEGFYEEHKGRPFFDGLVEFMTSGPIMVQVLEGENAIQRHRDLMGATNPDNALAGTLRADYADSFTENAVHGSDSEASAAREIAYFFTENEI 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_METCA (Nucleoside diphosphate kinase OS=Methylococcus capsulatus GN=ndk PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24 Identity = 54/124 (43.55%), Postives = 75/124 (60.48%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI RFEK G + K+ + R AE Y +PFF L+ ++ SGPV+ + EGE + R ++GATNP +APGTIR D A+ N +HGSD E+A +EIA +F Sbjct: 10 IKPDAVAKNVIGEIYSRFEKAGLRIVAAKMAQLSREQAEGFYAVHRERPFFNDLVSFMISGPVMIQVLEGENAIAKNRELMGATNPRDAAPGTIRADFAVSIDENAVHGSDGPETAAQEIAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_CAMJJ (Nucleoside diphosphate kinase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=ndk PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24 Identity = 55/129 (42.64%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKPD V++G++G+I+ RFE G + +K + + + AE Y +PFF L+E++ SGPVV + EGEG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EI +F I Sbjct: 8 IKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVHGSDSLENAKIEIEFFFKPNEI 136
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_CAMJD (Nucleoside diphosphate kinase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=ndk PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24 Identity = 55/129 (42.64%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKPD V++G++G+I+ RFE G + +K + + + AE Y +PFF L+E++ SGPVV + EGEG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EI +F I Sbjct: 8 IKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVHGSDSLENAKIEIEFFFKPNEI 136 The following BLAST results are available for this feature:
BLAST of CF835156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835156 ID=CF835156; Name=CF835156; organism=Citrus sinensis; type=EST; length=692bpback to top |