CF835156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_CHLAB (Nucleoside diphosphate kinase OS=Chlamydophila abortus GN=ndk PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.232e-24 Identity = 57/124 (45.97%), Postives = 77/124 (62.10%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + +GEII FEK GF + +K++ + AE Y S+PFF L++++ SGPVV M+ EG V R I+GATNP ++APGTIR G N +HGSDS+E+A EI +F Sbjct: 8 IKPDSVGKAHIGEIIAIFEKSGFRIAAMKMLHLSVKEAEGFYAVHKSRPFFQELVDFMISGPVVVMVLEGNNAVARNREIMGATNPQEAAPGTIRAQFGESIGINAVHGSDSLENAAIEINYFF 131
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_AGRT5 (Nucleoside diphosphate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndk PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.232e-24 Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKPD +R L G I FE G + K + + + AE Y +PFFG L+E +TSGP + + EGE + R I+GATNPAQ+A GTIR A+ G N +HGSD+ E+A +EIA WF + I Sbjct: 10 IKPDATKRNLTGAITKVFEDNGLRIVASKRVWMSKREAEGFYAVHKERPFFGELVEGMTSGPTIVQVLEGENAILKNREIMGATNPAQAAEGTIRKSFALSIGENSVHGSDAPETAAQEIAYWFAETEI 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_YERPY (Nucleoside diphosphate kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKP+ V +G I RFE GF + K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D A N +HGSD+VESAQ+EIA +F Sbjct: 10 IKPNAVANNNIGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIIVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFADSFTANAVHGSDAVESAQREIAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_YERPS (Nucleoside diphosphate kinase OS=Yersinia pseudotuberculosis GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKP+ V +G I RFE GF + K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D A N +HGSD+VESAQ+EIA +F Sbjct: 10 IKPNAVANNNIGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIIVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFADSFTANAVHGSDAVESAQREIAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_XANOR (Nucleoside diphosphate kinase OS=Xanthomonas oryzae pv. oryzae GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 57/124 (45.97%), Postives = 74/124 (59.68%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 10 IKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_XANOM (Nucleoside diphosphate kinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 57/124 (45.97%), Postives = 74/124 (59.68%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 10 IKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_XANCP (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 57/124 (45.97%), Postives = 74/124 (59.68%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 10 IKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_XANCB (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris (strain B100) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 57/124 (45.97%), Postives = 74/124 (59.68%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 10 IKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_XANC8 (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 57/124 (45.97%), Postives = 74/124 (59.68%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 10 IKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_XANC5 (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 57/124 (45.97%), Postives = 74/124 (59.68%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI RFEK G + K + R AE Y +PFF +L+E++ SGPV+ EGE V R ++GATNP +APGTIR D A N HGSDSVE+A E+A +F Sbjct: 10 IKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133 The following BLAST results are available for this feature:
BLAST of CF835156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835156 ID=CF835156; Name=CF835156; organism=Citrus sinensis; type=EST; length=692bpback to top |