CF835156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_BRUO2 (Nucleoside diphosphate kinase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=ndk PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 54/124 (43.55%), Postives = 75/124 (60.48%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD +R L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 10 IKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYTVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_BRUMB (Nucleoside diphosphate kinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ndk PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 54/124 (43.55%), Postives = 75/124 (60.48%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD +R L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 10 IKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_BRUC2 (Nucleoside diphosphate kinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ndk PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 54/124 (43.55%), Postives = 75/124 (60.48%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD +R L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 10 IKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_BRUAB (Nucleoside diphosphate kinase OS=Brucella abortus GN=ndk PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 54/124 (43.55%), Postives = 75/124 (60.48%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD +R L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 10 IKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_BRUA2 (Nucleoside diphosphate kinase OS=Brucella abortus (strain 2308) GN=ndk PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 54/124 (43.55%), Postives = 75/124 (60.48%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD +R L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 10 IKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_BRUA1 (Nucleoside diphosphate kinase OS=Brucella abortus (strain S19) GN=ndk PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 54/124 (43.55%), Postives = 75/124 (60.48%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD +R L G II + E+ G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA + GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 10 IKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_ARCB4 (Nucleoside diphosphate kinase OS=Arcobacter butzleri (strain RM4018) GN=ndk PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 54/124 (43.55%), Postives = 79/124 (63.71%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + +VG+I+ RFE G + K + + + AE Y +++PFF L+E++ SGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS+E+A+ EIA +F Sbjct: 8 IKPDAVAKNVVGKILDRFESAGLKIAATKKLQLSQADAEAFYAVHAARPFFKDLVEFMISGPVVVSVLEGENAMAKNRELMGATNPKEAAAGTIRADFADSIDANAVHGSDSLENAKNEIAFFF 131
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_ACISJ (Nucleoside diphosphate kinase OS=Acidovorax sp. (strain JS42) GN=ndk PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 52/125 (41.60%), Postives = 78/125 (62.40%), Query Frame = -1 Query: 318 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 692 IKPD V + ++G+I RFE G + +++ + R AE+ Y +PFF L++++ SGPV+ EGE V R ++GAT+P ++APGTIR D A N +HGSD+ E+AQ E+A +FP Sbjct: 10 IKPDAVAKNVIGQIYARFEAAGLKIAAARMIHLSRAEAEQFYAVHKERPFFKDLVDFMISGPVMVQALEGENAVLKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVAFFFP 134
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_YERPB (Nucleoside diphosphate kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ndk PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKP+ V +G I RFE GF + K++ + + AE Y + +PFF L+E++TSGP++ + EGE V+ R I+GATNP + GT+R D A N +HGSD+VESAQ+EIA +F Sbjct: 10 IKPNAVANNNIGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFADSFTANAVHGSDAVESAQREIAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_SULNB (Nucleoside diphosphate kinase OS=Sulfurovum sp. (strain NBC37-1) GN=ndk PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++G+I+ RFE G + K + R AE Y + +PFF L++++ SGPVV + EGE + R ++GATNPA++ PGTIR D A N +HGSDSVE+A+ EI +F Sbjct: 8 IKPDAVAKNVIGQILARFEAAGLRIAATKKTRLSRVDAEAFYAIHAERPFFKDLVDFMISGPVVVTVLEGENAMAKNRELMGATNPAEAEPGTIRADFADSIDANAVHGSDSVENAEIEINFFF 131 The following BLAST results are available for this feature:
BLAST of CF835156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835156 ID=CF835156; Name=CF835156; organism=Citrus sinensis; type=EST; length=692bpback to top |