CF835156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_ACIAC (Nucleoside diphosphate kinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ndk PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24 Identity = 50/125 (40.00%), Postives = 78/125 (62.40%), Query Frame = -1 Query: 318 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 692 IKPD V + ++G+I RFE G + ++ + R AE+ Y +PFF L++++ SGPV+ + EGE + R ++GAT+P ++APGTIR D A N +HGSD+ E+AQ E++ +FP Sbjct: 10 IKPDAVAKNVIGQIYARFEAAGLKIAAARMAHLSRQEAEQFYAVHKERPFFKDLVDFMISGPVMIQVLEGENAILKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVSFFFP 134
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_WOLWR (Nucleoside diphosphate kinase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=ndk PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23 Identity = 55/126 (43.65%), Postives = 77/126 (61.11%), Query Frame = -1 Query: 315 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 692 +KPD V+ + G+I E G + K+M + + AE YE +PFFG L+E++TSG V+ + GE V R I+GATNP Q+ GTIRGD A N +HGSDS+E+A+KEIA +F + Sbjct: 10 LKPDAVKNNITGKINSYIESSGLKIIAQKMMLLTKKQAELFYEIHKDRPFFGELVEFMTSGSVIVQVLVGENAVSKYRQIMGATNPKQADKGTIRGDFADDISENRVHGSDSLENARKEIAFFFAE 135
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_WOLTR (Nucleoside diphosphate kinase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=ndk PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23 Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = -1 Query: 315 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 692 +KPD V+ ++G I EK G + K+M + + AE Y +PFFG L+E++TSGPV+ + GE + R I+GAT+P Q+ GTIRGD A N +HGSDS+E+A KEIA +F + Sbjct: 10 LKPDTVKNNIIGNINSYIEKSGLRIIAQKMMLLTKKQAELFYAIHKDRPFFGGLVEFMTSGPVIVQVLVGENAISKYRQIMGATDPKQADKGTIRGDFADDVNENRVHGSDSLENAHKEIAFFFAE 135
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_VIBVY (Nucleoside diphosphate kinase OS=Vibrio vulnificus (strain YJ016) GN=ndk PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23 Identity = 55/129 (42.64%), Postives = 79/129 (61.24%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKPD V+R L+GEI R EK G + K++ ++ A Y + K FF +L E++TSGP++ + EGE + R ++G TNP ++A GTIR D A+ N +HGSDS SA +EIA +FP+ I Sbjct: 10 IKPDAVERNLIGEIYHRIEKAGLRIIAAKMVHLNDEQASGFYAEHEGKEFFPALKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTIRADYALSMRHNSVHGSDSPASAAREIAFFFPESEI 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_VIBVU (Nucleoside diphosphate kinase OS=Vibrio vulnificus GN=ndk PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23 Identity = 55/129 (42.64%), Postives = 79/129 (61.24%), Query Frame = -1 Query: 306 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 692 IKPD V+R L+GEI R EK G + K++ ++ A Y + K FF +L E++TSGP++ + EGE + R ++G TNP ++A GTIR D A+ N +HGSDS SA +EIA +FP+ I Sbjct: 10 IKPDAVERNLIGEIYHRIEKAGLRIIAAKMVHLNDEQASGFYAEHEGKEFFPALKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTIRADYALSMRHNSVHGSDSPASAAREIAFFFPESEI 138
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_VARPS (Nucleoside diphosphate kinase OS=Variovorax paradoxus (strain S110) GN=ndk PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23 Identity = 51/124 (41.13%), Postives = 77/124 (62.10%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++G+I+ RFE G + KL+ + R AE+ Y +PFF L++++ SGPV + EGE + R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +F Sbjct: 10 IKPDAVAKNVIGKIVSRFEAAGLKIVAAKLVHLSRNEAEQFYSVHKERPFFKDLVDFMISGPVFVQVLEGENAIAKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAANEVAFFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_PSEAE (Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa GN=ndk PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23 Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI+ RFEK G + K++ + A Y + +PFF L+ ++TSGPVV + EGE + R ++GAT+P ++ GTIR D A+ N +HGSDS SA +EIA +F Sbjct: 10 IKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_PSEAB (Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ndk PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23 Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI+ RFEK G + K++ + A Y + +PFF L+ ++TSGPVV + EGE + R ++GAT+P ++ GTIR D A+ N +HGSDS SA +EIA +F Sbjct: 10 IKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_PSEA8 (Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=ndk PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23 Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI+ RFEK G + K++ + A Y + +PFF L+ ++TSGPVV + EGE + R ++GAT+P ++ GTIR D A+ N +HGSDS SA +EIA +F Sbjct: 10 IKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFF 133
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_PSEA7 (Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa (strain PA7) GN=ndk PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23 Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = -1 Query: 321 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 692 IKPD V + ++GEI+ RFEK G + K++ + A Y + +PFF L+ ++TSGPVV + EGE + R ++GAT+P ++ GTIR D A+ N +HGSDS SA +EIA +F Sbjct: 10 IKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFF 133 The following BLAST results are available for this feature:
BLAST of CF835156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835156 ID=CF835156; Name=CF835156; organism=Citrus sinensis; type=EST; length=692bpback to top |