CF835156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK3_HUMAN (Nucleoside diphosphate kinase 3 OS=Homo sapiens GN=NME3 PE=1 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.259e-43 Identity = 82/142 (57.75%), Postives = 105/142 (73.94%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 692 +KPDGVQR LVGEI+ RFE+KGF L LKL+ +HY +L +PF+G L++Y+ SGPVVAM+W+G VV+T R +IGATNPA + PGTIRGD I G+N+IHGSDSVESA++EIALWF D + W+ S W+YE Sbjct: 28 VKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADELLCWEDSAGHWLYE 169
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_CARHZ (Nucleoside diphosphate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=ndk PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.644e-43 Identity = 85/142 (59.86%), Postives = 107/142 (75.35%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 692 +KPDGVQRGLVGEII RFEK+GF L GLKLM + R AE HY + KPFF L+ +ITSGPVVAM+WEG+ V+ T R ++GATNP ++ PGTIRG I GRN+IHGSDS ESA +EIAL+F + ++++ +L WIYE Sbjct: 8 VKPDGVQRGLVGEIISRFEKRGFKLVGLKLMQISRELAETHYGEHKGKPFFEGLLNFITSGPVVAMVWEGKEVIATAREMMGATNPLKAQPGTIRGTYGIDVGRNVIHGSDSPESAAREIALFFKEEELLSYEKTLDTWIYE 149
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_SYNJB (Nucleoside diphosphate kinase OS=Synechococcus sp. GN=ndk PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.147e-43 Identity = 82/142 (57.75%), Postives = 104/142 (73.24%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 692 IKPDGVQRGLVG II R E +G+ L GLKL+ V + AE HY + +PFF SL+++ITSGPVVAM+W+G+GV+ R +IG TNP ++ PGTIRGD I GRN+IHGSD VE+AQ+EIALWF + ++W WIYE Sbjct: 8 IKPDGVQRGLVGTIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHKERPFFHSLVKFITSGPVVAMVWQGKGVIAAARKLIGKTNPLEAEPGTIRGDFGIDIGRNLIHGSDGVETAQREIALWFDESELVSWTPVAQSWIYE 149
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_DESAP (Nucleoside diphosphate kinase OS=Desulforudis audaxviator (strain MP104C) GN=ndk PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.804e-43 Identity = 85/142 (59.86%), Postives = 105/142 (73.94%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 692 +KPDGVQRGLVGE+I RFE++GF L LKL+ +DR AE+HYE+ KPFF L+ YITSGPV AM+ EG VV T R ++GAT PA++ PGTIRG I GRNI+HGSDS SA +EI L+F DG I ++ +L PWIYE Sbjct: 8 VKPDGVQRGLVGEVITRFERRGFKLVALKLLWIDRGLAERHYEEHRGKPFFDELVRYITSGPVAAMVLEGREVVTTVREMMGATQPAKALPGTIRGTYGIDVGRNIVHGSDSAASAAREIGLFFADGELIEYERALDPWIYE 149
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_SYNSC (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9605) GN=ndk PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.663e-43 Identity = 84/142 (59.15%), Postives = 104/142 (73.24%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 692 IKPDGVQRGLVGEI+ RFE+KGF L GLK +T R AE+HY +PFF L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGSD+ E+AQ EI LWF +N W S W E Sbjct: 9 IKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAAETAQFEIGLWFQASELNDWSPSDQGWRVE 150
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_HELMI (Nucleoside diphosphate kinase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=ndk PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.663e-43 Identity = 84/142 (59.15%), Postives = 105/142 (73.94%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 692 IKPDGVQRGLVGEII RFEKKGF L G+K + + R AEKHY + KPFF L++YI SGPVVAM WEG+ +V R ++GATNPA++APGTIRG A+ GRNIIHGSDS SA++E+A++F D + W +L W+ E Sbjct: 8 IKPDGVQRGLVGEIISRFEKKGFKLVGMKFLRLTREMAEKHYAEHVGKPFFAGLVDYIISGPVVAMCWEGKDIVSVSREMMGATNPAKAAPGTIRGTYAVDIGRNIIHGSDSPASAERELAIYFQSDELVEWDRTLQGWLTE 149
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_SYNS3 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9311) GN=ndk PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.783e-43 Identity = 85/142 (59.86%), Postives = 105/142 (73.94%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 692 IKPDGVQRGLVGEI+ RFE+KGF L GLK +T R AE+HY +PFFG L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLAI GRN+IHGSD+ E+A+ EI LWF P +W S W E Sbjct: 10 IKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAEFEIGLWFNPSELSDWTPSDQTWRVE 151
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_MACCJ (Nucleoside diphosphate kinase OS=Macrococcus caseolyticus (strain JCSC5402) GN=ndk PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.247e-43 Identity = 84/141 (59.57%), Postives = 103/141 (73.05%), Query Frame = -1 Query: 273 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIY 692 IKPDGV RGL+GEI+ R E KG + G KLMTV A+ HY + S KPFFG L+E+ITSGPV AM+ EG+ VV+ GRT++G TNPA+SAPGTIRGD + G+NIIHGSDSV SA KEIALWF + I ++ W+Y Sbjct: 8 IKPDGVGRGLIGEIVKRIENKGIKVVGAKLMTVSEDLAKTHYGEHSEKPFFGELVEFITSGPVFAMVLEGDNVVEIGRTLVGKTNPAESAPGTIRGDFGMTVGKNIIHGSDSVASADKEIALWFKEEEILSYDLVTSAWVY 148
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_BACSK (Nucleoside diphosphate kinase OS=Bacillus clausii (strain KSM-K16) GN=ndk PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.247e-43 Identity = 77/140 (55.00%), Postives = 108/140 (77.14%), Query Frame = -1 Query: 276 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWI 692 +KPDGVQR L+G I+ RFE+KG++L KL+T+ + AE HY + +PFFG L+ +ITSGPV AM+WEGEGV+K R +IGATNP+++APGTIRGDLA+ G N++HGSDS ESA++EIA++F + +N +Q + W+ Sbjct: 8 VKPDGVQRNLIGNIVSRFEQKGYTLAAAKLVTLSKETAETHYSEHRERPFFGELVSFITSGPVFAMVWEGEGVIKAARQLIGATNPSEAAPGTIRGDLAVNVGMNVVHGSDSPESAEREIAIFFKEEELNDYQKDSNKWV 147
BLAST of CF835156 vs. ExPASy Swiss-Prot
Match: NDK_SYNJA (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndk PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.159e-43 Identity = 80/142 (56.34%), Postives = 102/142 (71.83%), Query Frame = -1 Query: 270 IKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 692 IKPDGVQRGLVG II R E +G+ L GLKL+ V + AE HY + +PFF L+++ITSGPVVAM+W+G+GV+ R +IG TNP + PGTIRGD I GRN++HGSD E+AQ+EIALWF + +NW + WIYE Sbjct: 8 IKPDGVQRGLVGSIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHRERPFFPGLVKFITSGPVVAMVWQGKGVIAAARKLIGKTNPLDAEPGTIRGDFGIDIGRNLVHGSDGPETAQREIALWFQESELVNWTPATQSWIYE 149 The following BLAST results are available for this feature:
BLAST of CF835156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835156 ID=CF835156; Name=CF835156; organism=Citrus sinensis; type=EST; length=692bpback to top |