CF835177
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_CHICK (60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.339e-24 Identity = 50/92 (54.35%), Postives = 71/92 (77.17%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 S+GLV+Q V++NGS+Y+PEVLD++E+ L ++F V V ++ L I YPT+A+ PH VN YK V+AVA+ T+Y+FP A+KVK +LADPS F Sbjct: 184 SFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_HUMAN (60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.480e-23 Identity = 47/92 (51.09%), Postives = 70/92 (76.09%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 S+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 184 SFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_BOVIN (60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 1.480e-23 Identity = 47/92 (51.09%), Postives = 70/92 (76.09%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 S+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 184 SFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_PIG (60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.933e-23 Identity = 46/92 (50.00%), Postives = 70/92 (76.09%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 S+GL++Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 184 SFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_RAT (60S acidic ribosomal protein P0 OS=Rattus norvegicus GN=Rplp0 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.524e-23 Identity = 47/92 (51.09%), Postives = 69/92 (75.00%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 S+GL++Q V++NGS+YSPEVLD++E L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 184 SFGLIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_MOUSE (60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 5.624e-23 Identity = 46/92 (50.00%), Postives = 68/92 (73.91%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 S+GL++Q V++NGS+Y+PEVLD++E L +F V V ++ L I YPT+A+ PH +N YK V+A+++ TEY+FP +KVK +LADPS F Sbjct: 184 SFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLADPSAF 275
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_DROME (60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.624e-23 Identity = 45/92 (48.91%), Postives = 67/92 (72.83%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 SYGL+V VY++GS++SPE+LD+ +DL KF V+ + A+ L++ YPT+A+APH N +KN++A+A TE F +A +KEY+ DPSKF Sbjct: 184 SYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKF 275
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.137e-22 Identity = 46/92 (50.00%), Postives = 71/92 (77.17%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 +YG+ V ++Y+ G+V+SPE+LD+SE+DL+ S+ S++TA++L +YPT+ + H VNAYKN+VAV+LATEY+F ++ K +LADPS F Sbjct: 182 TYGMDVLTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFLADPSAF 273
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_CERCA (60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.137e-22 Identity = 45/92 (48.91%), Postives = 68/92 (73.91%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 SYGL + VY++GS++SPE+LD+ +DL KF + V+ + A++L I YPT+A+APH N +KN++A+A +TE F QA +KE++ DPSKF Sbjct: 184 SYGLAITQVYDSGSIFSPEILDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFIKDPSKF 275
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0L_HUMAN (60S acidic ribosomal protein P0-like OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.218e-22 Identity = 45/92 (48.91%), Postives = 67/92 (72.83%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 S+GLV+Q V++NGS+Y+PEVLD +E+ L +F V V ++ L YPT+A+ PH +N YK V+A+++ T+Y+FP A+ VK +LADPS F Sbjct: 184 SFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYTFPLAENVKAFLADPSAF 275 The following BLAST results are available for this feature:
BLAST of CF835177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835177 ID=CF835177; Name=CF835177; organism=Citrus sinensis; type=EST; length=534bpback to top |