CF835177
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_CAEEL (60S acidic ribosomal protein P0 OS=Caenorhabditis elegans GN=rpa-0 PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 1.173e-20 Identity = 43/92 (46.74%), Postives = 70/92 (76.09%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 SYGLVV+ VY++G++Y+PEVLD++ ++L ++F S V V +++LA++YPTLA+ H N +N++ VA T+ SF +A+ +K ++ADPSKF Sbjct: 184 SYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF 275
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_CHERU (60S acidic ribosomal protein P0 OS=Chenopodium rubrum PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.114e-18 Identity = 43/56 (76.79%), Postives = 53/56 (94.64%), Query Frame = -1 Query: 367 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPH 534 SYGL V+SVY++GSV+SPEVLDL+EDDL+ +FA+ VSMVT+L+LAISYPTLAAAPH Sbjct: 187 SYGLNVESVYDDGSVFSPEVLDLTEDDLLARFATGVSMVTSLSLAISYPTLAAAPH 242
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_EIMTE (60S acidic ribosomal protein P0 OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.213e-17 Identity = 39/92 (42.39%), Postives = 64/92 (69.57%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 +YGL V+ VY+NGSVYS VLD++++ ++E FA+ + V A++ A+ P+ AAAPH + A++N A+ L T + FPQ ++KE + +P+ F Sbjct: 183 TYGLKVEHVYDNGSVYSASVLDITDEQILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLKEMVENPAAF 274
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.611e-17 Identity = 35/92 (38.04%), Postives = 69/92 (75.00%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 +YG+ + VY+ G+ + +VLD+SE+ L++ F+++++ + +L+LA+++PTL + H VNAYK V+AVA+ TE S+P+ +++K+ +A+P + Sbjct: 182 TYGMGIAQVYDQGNTFPSDVLDISEEQLLKAFSTAITTIASLSLALNFPTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELKDRIANPEAY 273
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_YEAST (60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae GN=RPP0 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.022e-17 Identity = 35/92 (38.04%), Postives = 64/92 (69.57%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 ++GL V VY+NG V+ +LD+++++LV F S+VS + +++LAI YPTL + H +N YK+++AVA+A Y +P+ + + + + +P K+ Sbjct: 182 TFGLTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRIENPEKY 273
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.022e-17 Identity = 35/92 (38.04%), Postives = 68/92 (73.91%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 +YG+ + VY+ G+ + VLD+SE+ L++ F+S+++ + A++LA+++PTL + H VN+YK V+AVA+ TE S+P+ +++K+ +A+P + Sbjct: 182 TYGMGIAQVYDQGNTFPSSVLDISEEQLLKAFSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELKDRIANPEAY 273
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_PLAF8 (60S acidic ribosomal protein P0 OS=Plasmodium falciparum (isolate 7G8) GN=RPLP0 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.342e-16 Identity = 38/92 (41.30%), Postives = 67/92 (72.83%), Query Frame = -1 Query: 259 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 534 SYG+ V++VY++G +Y +VLD++++D++EKF+ VS V AL+ A T A+ PH+FV A+KN+VA+ + ++Y+FP +K+++ +P F Sbjct: 184 SYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWVENPEAF 275
BLAST of CF835177 vs. ExPASy Swiss-Prot
Match: RLA0_DICDI (60S acidic ribosomal protein P0 OS=Dictyostelium discoideum GN=rplp0 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 3.654e-14 Identity = 35/87 (40.23%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 274 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLA 534 +YGL + +Y+ G+ YSP + SE+DL+ KF + + A++L I YPT+A+ PH +NA+KN++A++ T Y+F A+K K A Sbjct: 183 TYGLEPKIIYDAGACYSPSI---SEEDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFKSAAA 266 The following BLAST results are available for this feature:
BLAST of CF835177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835177 ID=CF835177; Name=CF835177; organism=Citrus sinensis; type=EST; length=534bpback to top |