CF835178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835178 vs. ExPASy Swiss-Prot
Match: RLA0_CHICK (60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.982e-24 Identity = 49/92 (53.26%), Postives = 71/92 (77.17%), Query Frame = 2 Query: 2 SYGLVVQSVYENGSVYSPQVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 277 S+GLV+Q V++NGS+Y+P+VLD++E+ L ++F V V ++ L I YPT+A+ PH VN YK V+AVA+ T+Y+FP A+KVK +LADPS F Sbjct: 184 SFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CF835178 vs. ExPASy Swiss-Prot
Match: RLA0_HUMAN (60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.297e-23 Identity = 46/92 (50.00%), Postives = 70/92 (76.09%), Query Frame = 2 Query: 2 SYGLVVQSVYENGSVYSPQVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 277 S+GLV+Q V++NGS+Y+P+VLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 184 SFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CF835178 vs. ExPASy Swiss-Prot
Match: RLA0_BOVIN (60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 3.297e-23 Identity = 46/92 (50.00%), Postives = 70/92 (76.09%), Query Frame = 2 Query: 2 SYGLVVQSVYENGSVYSPQVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 277 S+GLV+Q V++NGS+Y+P+VLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 184 SFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CF835178 vs. ExPASy Swiss-Prot
Match: RLA0_PIG (60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 4.306e-23 Identity = 45/92 (48.91%), Postives = 70/92 (76.09%), Query Frame = 2 Query: 2 SYGLVVQSVYENGSVYSPQVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 277 S+GL++Q V++NGS+Y+P+VLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 184 SFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CF835178 vs. ExPASy Swiss-Prot
Match: RLA0_RAT (60S acidic ribosomal protein P0 OS=Rattus norvegicus GN=Rplp0 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 5.624e-23 Identity = 46/92 (50.00%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 2 SYGLVVQSVYENGSVYSPQVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 277 S+GL++Q V++NGS+YSP+VLD++E L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 184 SFGLIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of CF835178 vs. ExPASy Swiss-Prot
Match: RLA0_MOUSE (60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 1.253e-22 Identity = 45/92 (48.91%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 2 SYGLVVQSVYENGSVYSPQVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 277 S+GL++Q V++NGS+Y+P+VLD++E L +F V V ++ L I YPT+A+ PH +N YK V+A+++ TEY+FP +KVK +LADPS F Sbjct: 184 SFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLADPSAF 275
BLAST of CF835178 vs. ExPASy Swiss-Prot
Match: RLA0_DROME (60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.253e-22 Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 2 SYGLVVQSVYENGSVYSPQVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 277 SYGL+V VY++GS++SP++LD+ +DL KF V+ + A+ L++ YPT+A+APH N +KN++A+A TE F +A +KEY+ DPSKF Sbjct: 184 SYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKF 275
BLAST of CF835178 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.761e-22 Identity = 45/92 (48.91%), Postives = 71/92 (77.17%), Query Frame = 2 Query: 2 SYGLVVQSVYENGSVYSPQVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 277 +YG+ V ++Y+ G+V+SP++LD+SE+DL+ S+ S++TA++L +YPT+ + H VNAYKN+VAV+LATEY+F ++ K +LADPS F Sbjct: 182 TYGMDVLTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFLADPSAF 273
BLAST of CF835178 vs. ExPASy Swiss-Prot
Match: RLA0_CERCA (60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.761e-22 Identity = 44/92 (47.83%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 2 SYGLVVQSVYENGSVYSPQVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 277 SYGL + VY++GS++SP++LD+ +DL KF + V+ + A++L I YPT+A+APH N +KN++A+A +TE F QA +KE++ DPSKF Sbjct: 184 SYGLAITQVYDSGSIFSPEILDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFIKDPSKF 275
BLAST of CF835178 vs. ExPASy Swiss-Prot
Match: RLA0L_HUMAN (60S acidic ribosomal protein P0-like OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.385e-21 Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 2 SYGLVVQSVYENGSVYSPQVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 277 S+GLV+Q V++NGS+Y+P+VLD +E+ L +F V V ++ L YPT+A+ PH +N YK V+A+++ T+Y+FP A+ VK +LADPS F Sbjct: 184 SFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYTFPLAENVKAFLADPSAF 275 The following BLAST results are available for this feature:
BLAST of CF835178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835178 ID=CF835178; Name=CF835178; organism=Citrus sinensis; type=EST; length=536bpback to top |