CF835193

Overview
NameCF835193
Unique NameCF835193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1791 contig Csv1_Contig1791:143..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AK2H_ECOLI (Bifunctional aspartokinase/homoserine dehydrogenase 2 OS=Escherichia coli (strain K12) GN=metL PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.671e-23
Identity = 60/141 (42.55%), Postives = 87/141 (61.70%), Query Frame = -1
Query:  222 DVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 644
            DV RK++ILARE+G  +E   + V SLVP   +   S + F +   + +E++ ++ + A + G VLRYV   DA N + RV +   ++DHP A L   DN+ A  ++ Y++ PL++RGPGAG  VTAG I SDI RLA  L
Sbjct:  672 DVMRKLVILAREAGYNIEPDQVRVESLVPAHCEG-GSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVARFDA-NGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQSDINRLAQLL 810          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AKH_BUCAP (Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=thrA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.291e-23
Identity = 51/137 (37.23%), Postives = 87/137 (63.50%), Query Frame = -1
Query:  234 DVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRL 644
            DVARK+++LARE G  +EL D+ +  ++PE  K   ++EEF+ +L + D   +++  +A D G VLR++G ++  N +  V++     ++P  ++   +N + F T  Y+  PL++RG GAG  VTA G+FSD+LR+
Sbjct:  677 DVARKLLVLAREIGYSIELKDISIEPILPERFKKYQNSEEFLFKLKELDSFFSERVNKARDIGNVLRFIGSIEK-NGKCSVKIEEINSNNPLYKVKNGENALTFYTNYYQPIPLVLRGYGAGNDVTASGVFSDLLRI 812          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AKH_BUCBP (Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=thrA PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.847e-22
Identity = 55/139 (39.57%), Postives = 89/139 (64.03%), Query Frame = -1
Query:  234 DVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDH--PFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRL 644
            DVARK++ILARE G KLEL D+ +  L+P+     ++  +F+ +L + D+    + ++A   G+ LR+VG+   IN++G  +++  + DH  P   +   +N +AF +K Y+  PL++RG GAG  VTA GIFSD+LR+
Sbjct:  679 DVARKLLILAREVGYKLELKDIKIEPLLPKEFNNISNTTDFITKLKELDQIFCNRVKKARKLGKRLRFVGI---INQKGNCQVKIDEVDHNDPLYNIKNGENALAFYSKYYQPIPLVLRGYGAGNNVTASGIFSDVLRI 814          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AK1H_ECOLI (Bifunctional aspartokinase/homoserine dehydrogenase 1 OS=Escherichia coli (strain K12) GN=thrA PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.412e-22
Identity = 57/142 (40.14%), Postives = 88/142 (61.97%), Query Frame = -1
Query:  225 DVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEG--RVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASY 644
            DVARK++ILARE+G +LEL+D+ +  ++P    A      FM  L Q D+  A +  +A D G+VLRYVG +D   ++G  RV++     + P  ++   +N +AF +  Y+  PL++RG GAG  VTA G+F+D+LR  S+
Sbjct:  678 DVARKLLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEGKVLRYVGNID---EDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSW 816          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AKH_BUCAI (Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=thrA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.549e-21
Identity = 51/139 (36.69%), Postives = 85/139 (61.15%), Query Frame = -1
Query:  228 DVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLAS 644
            DVARK++ILARESG  +EL D+ +  L+P   K     ++F+ +L + D   + + ++A + G VLR+V  ++   ++  ++L     ++P  ++   +N +AF T  Y+  PL++RG GAG  VTA G+FSD+LR  S
Sbjct:  679 DVARKLLILARESGYNIELKDIKIEPLLPNNFKIYEDTDKFLLKLKELDVYFSNKIKQALNVGNVLRFVATIEQ-KRQFFIKLEEVNINNPLYKVKNGENALAFYTNYYQPIPLVLRGYGAGNNVTASGVFSDLLRTLS 816          
The following BLAST results are available for this feature:
BLAST of CF835193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AK2H_ECOLI1.671e-2342.55Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH_BUCAP8.291e-2337.23Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH_BUCBP1.847e-2239.57Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AK1H_ECOLI2.412e-2240.14Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH_BUCAI4.549e-2136.69Bifunctional aspartokinase/homoserine dehydrogenas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835193 ID=CF835193; Name=CF835193; organism=Citrus sinensis; type=EST; length=647bp
GCCGAACTAAACATATACTTATTTATACTTTCAAGCTACTAGATAAACTT
TATTTTGAAAGTTCGTAAGTTCCAAGACGACTAAGATACGTAATTACTAA
CTCAAAACACTATCATCATCCAGCAGATAAAACTACCAATGCTACTGCCT
CAAATAACCAAAAAGAGAAGGCTAAAACCAGTCTGAAAGGCATAGAAATT
GATACACTATGATGGGGCACCAAGATATGAGGCCAGCCGCAATATATCGC
TGAAGATACCACCTGCTGTGACTTGAGCTCCGGCACCAGGTCCACGGACG
ATAAGTGGCTGCTCCTTGTATCGTTTTGTTGTGAAAGCTATGATGTTATC
AGAACCAGAGAGCTGTGCAAATGGATGATCTTTCTTGTATCTTCGCAACT
CTACACGCCCCTCTTTGTTGATAGCATCCACCACTCCCACATATCTAAGG
ACTTCCCCTGCATCCTCGGCCTCTTGTCTTTGCTTGGCCAATTCTTCGTC
AAATTGTGGTAATTGCTTCATAAACTCTTCAGCAGATGCACAAGCTTTTA
ATGGTTCTGGCACAAGACTTCGAACAGGGAGATCAGAAAGTTCCAGCTTA
AGACCGGATTCTCGGGCAAGAATTATCACCTTTCTGGCAACATCTGT
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