CF835206

Overview
NameCF835206
Unique NameCF835206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835206_ssr356 microsatellite CF835206_ssr356:356..379. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1381..1965. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.186e-22
Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQLE W EK++GKYEKKV VLPKHLDEKVA  HLGKLG +LT+L K+Q++Y+S+  +GPYKP  YRY
Sbjct:  418 IAQLELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPPHYRY 485
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.686e-22
Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQLE W EK++GKYEKKV VLPKHLDEKVAA HLGKLG +LT+L K Q++YIS+  +GPYK   YRY
Sbjct:  418 IAQLELWNEKASGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKSQSDYISIPIEGPYKLRLYRY 485
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_HALHL (Adenosylhomocysteinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.559e-17
Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E +   + GKYEK V VLPKHLDEKVAA HLG++G  LTRL +EQA YI VS DGP+KP  YRY
Sbjct:  365 MAQMELYN--NPGKYEKDVYVLPKHLDEKVAALHLGRVGANLTRLSEEQAGYIGVSVDGPFKPEWYRY 430
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_XANOP (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ahcY PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.695e-16
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ++ W+++ T  YEKKV +LPKHLDE+VA  HL K+G KLT L K+QA+Y+ V   GPYKP  YRY
Sbjct:  415 LAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_XANOM (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ahcY PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.695e-16
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ++ W+++ T  YEKKV +LPKHLDE+VA  HL K+G KLT L K+QA+Y+ V   GPYKP  YRY
Sbjct:  415 LAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_XANAC (Adenosylhomocysteinase OS=Xanthomonas axonopodis pv. citri GN=ahcY PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.695e-16
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ++ W+++ T  YEKKV +LPKHLDE+VA  HL K+G KLT L K+QA+Y+ V   GPYKP  YRY
Sbjct:  415 LAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_XANC5 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.825e-16
Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ++ W+++ T  YEKKV +LPKHLDE+VA  HL K+G KLT L K+QA+Y+ V  +GP+KP  YRY
Sbjct:  415 LAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVPVEGPFKPDHYRY 480
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.231e-16
Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W   S  +YE KV VLPKHLDEKVA  HL KLG  LT+L  EQA YI V+ +GP+KP  YRY
Sbjct:  400 LAQIELWTRGS--QYENKVYVLPKHLDEKVARLHLAKLGANLTKLSPEQAAYIGVTPEGPFKPDHYRY 465
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_XANCP (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris GN=ahcY PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.075e-15
Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ++ W+++ +  YEKKV +LPKHLDE+VA  HL K+G KLT L K+QA+Y+ V   GPYKP  YRY
Sbjct:  415 LAQIDLWEKRDS--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_XANC8 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ahcY PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.075e-15
Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ++ W+++ +  YEKKV +LPKHLDE+VA  HL K+G KLT L K+QA+Y+ V   GPYKP  YRY
Sbjct:  415 LAQIDLWEKRDS--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
The following BLAST results are available for this feature:
BLAST of CF835206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
SAHH1_ARATH1.186e-2269.12Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_WHEAT7.686e-2270.59Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]
SAHH_HALHL2.559e-1764.71Adenosylhomocysteinase OS=Halorhodospira halophila... [more]
SAHH_XANOP3.695e-1657.35Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANOM3.695e-1657.35Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANAC3.695e-1657.35Adenosylhomocysteinase OS=Xanthomonas axonopodis p... [more]
SAHH_XANC54.825e-1655.88Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_MESSB8.231e-1660.29Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_XANCP1.075e-1555.88Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_XANC81.075e-1555.88Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835206 ID=CF835206; Name=CF835206; organism=Citrus sinensis; type=EST; length=591bp
TTTTTTTTTTTTTTTTTCATAATGATTTTTCATTTAAATAAGAAACTGCG
TATAAAGATTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGA
TAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCACCAAATACAAA
ATAATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCT
TCAAGCAAGGGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCC
AAACACACACTACTACGAAATTTAAACCTAACATCCTACTACAGATCATC
ATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACA
TTCACTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGCGA
AGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTACTCAGCCTGCTC
CTTGGGGAGCCTGGTGAGCTTACCTCCAAGTTTGCCAAGGTGAAAAGCAG
CAACCTTTTCATCGAGGTGCTTGGGCAAAACGCACACCTTCTTCTCGTAC
TTGCCGGTGCTCTTCTCCTTCCAAAACTCAAGCTGGGCAAT
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