CF835206

Overview
NameCF835206
Unique NameCF835206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835206_ssr356 microsatellite CF835206_ssr356:356..379. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1381..1965. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_PROMP (Adenosylhomocysteinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.075e-15
Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E + +    +Y K+V VLPKHLDE VA  HL K+G KLT+L K+QA+YI+VS +GPYKP +YRY
Sbjct:  407 LAQIELFNKSD--EYSKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKDQADYINVSVEGPYKPEQYRY 472
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.075e-15
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W+  ++ +YE KV VLPK LDEKVA  HL  LG KLTR+ ++QA+Y+ V  DGPYKP  YRY
Sbjct:  410 LAQIELWQ--NSDRYENKVYVLPKQLDEKVARLHLANLGVKLTRMTEKQADYLGVPVDGPYKPEHYRY 475
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_PROM9 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ahcY PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.404e-15
Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E + +    KY K+V VLPKHLDE VA  HL K+G KLT+L +EQA+YI+VS +GPYKP  YRY
Sbjct:  407 LAQIELFNKSE--KYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTEEQADYINVSVEGPYKPELYRY 472
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_CAUCR (Adenosylhomocysteinase OS=Caulobacter crescentus GN=ahcY PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.404e-15
Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W  K+  KYE +V  LPKHLDEKVA  HL KLG KLT L K+QA+YI V   GP+KP  YRY
Sbjct:  398 LAQIELWTNKA--KYENQVYTLPKHLDEKVAFLHLEKLGAKLTTLRKDQADYIGVPEAGPFKPDHYRY 463
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_GRAFK (Adenosylhomocysteinase OS=Gramella forsetii (strain KT0803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.395e-15
Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E WK  +T +Y+ +V +LPKHLDEKVA  HL ++G +LT L ++QAEYI V+ +GPYKP  YRY
Sbjct:  373 LAQIELWK--NTDEYKNEVYMLPKHLDEKVAKLHLERIGVELTELKQDQAEYIGVTVEGPYKPEYYRY 438
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_NOVAD (Adenosylhomocysteinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.128e-15
Identity = 40/68 (58.82%), Postives = 53/68 (77.94%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E + + +  +Y+ +V VLPKHLDEKVAA HL KLG KLT+L K+QA+YI VS +GP+KP  YRY
Sbjct:  403 LAQIELFTKNA--EYKNEVYVLPKHLDEKVAALHLEKLGVKLTKLSKKQADYIGVSQEGPFKPDHYRY 468
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.128e-15
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E W +    +Y+ +V  LPKHLDEKVA  H+  LGG+LT+L K+QAEY+ V  +GPYKP  YRY
Sbjct:  427 IAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTU (Adenosylhomocysteinase OS=Mycobacterium tuberculosis GN=ahcY PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.128e-15
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E W +    +Y+ +V  LPKHLDEKVA  H+  LGG LT+L KEQAEY+ V  +GPYKP  YRY
Sbjct:  430 IAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTA (Adenosylhomocysteinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ahcY PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.128e-15
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E W +    +Y+ +V  LPKHLDEKVA  H+  LGG LT+L KEQAEY+ V  +GPYKP  YRY
Sbjct:  430 IAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_MYCPA (Adenosylhomocysteinase OS=Mycobacterium paratuberculosis GN=ahcY PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.128e-15
Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E W +    +Y+ +V  LPKHLDEKVA  H+  LGG+LT+L KEQAEYI V  DGPYK   YRY
Sbjct:  431 IAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGELTKLTKEQAEYIGVDVDGPYKADHYRY 496
The following BLAST results are available for this feature:
BLAST of CF835206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
SAHH_PROMP1.075e-1557.35Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PELCD1.075e-1557.35Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]
SAHH_PROM91.404e-1558.82Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_CAUCR1.404e-1560.29Adenosylhomocysteinase OS=Caulobacter crescentus G... [more]
SAHH_GRAFK2.395e-1555.88Adenosylhomocysteinase OS=Gramella forsetii (strai... [more]
SAHH_NOVAD3.128e-1558.82Adenosylhomocysteinase OS=Novosphingobium aromatic... [more]
SAHH_MYCUA3.128e-1555.88Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCTU3.128e-1557.35Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCTA3.128e-1557.35Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCPA3.128e-1558.82Adenosylhomocysteinase OS=Mycobacterium paratuberc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835206 ID=CF835206; Name=CF835206; organism=Citrus sinensis; type=EST; length=591bp
TTTTTTTTTTTTTTTTTCATAATGATTTTTCATTTAAATAAGAAACTGCG
TATAAAGATTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGA
TAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCACCAAATACAAA
ATAATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCT
TCAAGCAAGGGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCC
AAACACACACTACTACGAAATTTAAACCTAACATCCTACTACAGATCATC
ATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACA
TTCACTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGCGA
AGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTACTCAGCCTGCTC
CTTGGGGAGCCTGGTGAGCTTACCTCCAAGTTTGCCAAGGTGAAAAGCAG
CAACCTTTTCATCGAGGTGCTTGGGCAAAACGCACACCTTCTTCTCGTAC
TTGCCGGTGCTCTTCTCCTTCCAAAACTCAAGCTGGGCAAT
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