CF835206

Overview
NameCF835206
Unique NameCF835206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835206_ssr356 microsatellite CF835206_ssr356:356..379. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1381..1965. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_PROM2 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E + +    +Y K+V VLPKHLDE VA  HL K+G KLT+L KEQA+YI+VS +GPYK   YRY
Sbjct:  407 LAQIELFNKSE--QYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKEQADYINVSVEGPYKSELYRY 472
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_NITEU (Adenosylhomocysteinase OS=Nitrosomonas europaea GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGK-YEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W+    GK Y+KKV VLPK LDE VA  HLGKLG KLT L  EQA Y+++  +GPYKP  YRY
Sbjct:  413 LAQIELWQN---GKDYQKKVYVLPKRLDEMVARLHLGKLGVKLTELTDEQAHYLNLDKNGPYKPEMYRY 478
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_NITEC (Adenosylhomocysteinase OS=Nitrosomonas eutropha (strain C91) GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGK-YEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W+    GK Y+KKV VLPK LDE VA  HLGKLG KLT L  EQA Y+++  +GPYKP  YRY
Sbjct:  413 LAQMELWQN---GKDYQKKVYVLPKQLDEMVARLHLGKLGVKLTELTDEQAHYLNLDKNGPYKPEMYRY 478
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_METPB (Adenosylhomocysteinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W   + GKYE++V  LPK LDEKVAA HL K+G KL++L  +QA YI VS +GP+KP  YRY
Sbjct:  403 LAQIELWT--NPGKYERQVYTLPKTLDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQNGPFKPEHYRY 468
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_CHRVO (Adenosylhomocysteinase OS=Chromobacterium violaceum GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E +      KYEKKV VLPKHLDEKVA  HL ++G +LT L  +QA YISV   GPYKP  YRY
Sbjct:  401 LAQIELFANGH--KYEKKVYVLPKHLDEKVARLHLARIGARLTELSDQQAAYISVPKQGPYKPDHYRY 466
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSS (Adenosylhomocysteinase OS=Mycobacterium sp. (strain MCS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14
Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E W +    +Y+  V  L KHLDEKVA  H+  LGG LT+L KEQAEYI+V  +GPYKP  YRY
Sbjct:  424 IAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSK (Adenosylhomocysteinase OS=Mycobacterium sp. (strain KMS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14
Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E W +    +Y+  V  L KHLDEKVA  H+  LGG LT+L KEQAEYI+V  +GPYKP  YRY
Sbjct:  424 IAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSJ (Adenosylhomocysteinase OS=Mycobacterium sp. (strain JLS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14
Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E W +    +Y+  V  L KHLDEKVA  H+  LGG LT+L KEQAEYI+V  +GPYKP  YRY
Sbjct:  424 IAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_METS4 (Adenosylhomocysteinase OS=Methylobacterium sp. (strain 4-46) GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14
Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W  +  GKYE +V  LPK LDEKVAA HL K+G KLT L  +QA YI V A GP+KP  YRY
Sbjct:  403 LAQIELWTNQ--GKYENQVYTLPKTLDEKVAALHLEKIGVKLTTLRPDQAAYIGVQASGPFKPDHYRY 468
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_CUPTR (Adenosylhomocysteinase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14
Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E W+E+ +GKY   V  LPKHLDEKVA   L KL  +LT L  +QA YI V  +GPYK   YRY
Sbjct:  405 IAQIELWQERDSGKYPVGVYTLPKHLDEKVARLQLRKLNAQLTELTDQQAAYIGVKKEGPYKADHYRY 472
The following BLAST results are available for this feature:
BLAST of CF835206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
SAHH_PROM21.188e-1457.35Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_NITEU1.188e-1459.42Adenosylhomocysteinase OS=Nitrosomonas europaea GN... [more]
SAHH_NITEC1.188e-1459.42Adenosylhomocysteinase OS=Nitrosomonas eutropha (s... [more]
SAHH_METPB1.188e-1457.35Adenosylhomocysteinase OS=Methylobacterium populi ... [more]
SAHH_CHRVO1.188e-1458.82Adenosylhomocysteinase OS=Chromobacterium violaceu... [more]
SAHH_MYCSS1.552e-1457.35Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSK1.552e-1457.35Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSJ1.552e-1457.35Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_METS41.552e-1458.82Adenosylhomocysteinase OS=Methylobacterium sp. (st... [more]
SAHH_CUPTR1.552e-1455.88Adenosylhomocysteinase OS=Cupriavidus taiwanensis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835206 ID=CF835206; Name=CF835206; organism=Citrus sinensis; type=EST; length=591bp
TTTTTTTTTTTTTTTTTCATAATGATTTTTCATTTAAATAAGAAACTGCG
TATAAAGATTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGA
TAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCACCAAATACAAA
ATAATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCT
TCAAGCAAGGGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCC
AAACACACACTACTACGAAATTTAAACCTAACATCCTACTACAGATCATC
ATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACA
TTCACTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGCGA
AGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTACTCAGCCTGCTC
CTTGGGGAGCCTGGTGAGCTTACCTCCAAGTTTGCCAAGGTGAAAAGCAG
CAACCTTTTCATCGAGGTGCTTGGGCAAAACGCACACCTTCTTCTCGTAC
TTGCCGGTGCTCTTCTCCTTCCAAAACTCAAGCTGGGCAAT
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