CF835206

Overview
NameCF835206
Unique NameCF835206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_METEP (Adenosylhomocysteinase OS=Methylobacterium extorquens (strain PA1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.027e-14
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = -1
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W   + GKYE++V  LPK LDEKVAA HL K+G KL++L  +QA YI VS  GP+KP  YRY
Sbjct:  403 LAQIELWT--NPGKYERQVYTLPKALDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY 468          
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.027e-14
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = -1
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W   + GKYE++V  LPK LDEKVAA HL K+G KL++L  +QA YI VS  GP+KP  YRY
Sbjct:  403 LAQIELWT--NPGKYERQVYTLPKALDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY 468          
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_RHIE6 (Adenosylhomocysteinase OS=Rhizobium etli (strain CIAT 652) GN=ahcY PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.648e-14
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = -1
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E + +   G+YE KV +LPKHLDEKVA  HL KLG KLT+L +EQA YI VS  GP+K   YRY
Sbjct:  401 LAQIELFTKP--GQYENKVYILPKHLDEKVARLHLDKLGVKLTQLSEEQAAYIGVSPKGPFKSDHYRY 466          
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.648e-14
Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = -1
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E +   +  KYE KV VLPKHLDEKVA  HL K+G +LT L  EQA YI V  +GPYKP  YRY
Sbjct:  407 LAQIELFCHGA--KYENKVYVLPKHLDEKVARLHLKKIGARLTELSDEQAAYIGVPKEGPYKPDHYRY 472          
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_SYNSC (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9605) GN=ahcY PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.516e-14
Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = -1
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E + +    +Y K+V VLPKHLDE VA  HLG++G  LT L K+QA+YI+V  +GPYKP  YRY
Sbjct:  411 LAQIELFTKGD--EYAKEVYVLPKHLDEMVARLHLGRIGANLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.516e-14
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = -1
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E + + S  +Y K+V VLPKHLDE VA  HL K+G KLT L K+QA+YI+V  +GPYKP  YRY
Sbjct:  411 LAQIELFTKGS--EYGKEVYVLPKHLDEMVARLHLEKIGCKLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_PLACH (Adenosylhomocysteinase OS=Plasmodium chabaudi GN=PC000295.02.0 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.516e-14
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = -1
Query:  388 AQLEFWKEKSTGKYEK-KVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 588
            AQLE W+ ++TGKYEK K  +LPK LDEKVA +HL KL   LT L   Q E++ VS +GP+K   YRY
Sbjct:  412 AQLELWENRNTGKYEKNKSYILPKELDEKVAYYHLKKLNATLTELDDNQCEFLGVSKNGPFKSEAYRY 479          
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_RHIEC (Adenosylhomocysteinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ahcY PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.898e-14
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = -1
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E + +   G+YE KV +LPKHLDEKVA  HL KLG KLT+L +EQA YI V   GP+K   YRY
Sbjct:  401 LAQIELFTKP--GQYENKVYILPKHLDEKVARLHLDKLGVKLTQLSEEQAAYIGVKPQGPFKSDHYRY 466          
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_COREF (Adenosylhomocysteinase OS=Corynebacterium efficiens GN=ahcY PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.898e-14
Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = -1
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E ++ +  G+YE +V  LPK LDEKVA  H+  LGGKLT L KEQAEYI V   GP+KP  YRY
Sbjct:  413 IAQIELFQNE--GQYENQVYRLPKILDEKVARIHVEALGGKLTELTKEQAEYIGVDVAGPFKPEHYRY 478          
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_BRASB (Adenosylhomocysteinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ahcY PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.898e-14
Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = -1
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E +     GKY+K+V VLPK LDEKVA  HL K+G KLT L  +QA YI V  +GP+K   YRY
Sbjct:  406 LAQIELYANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRPDQAAYIGVKQEGPFKSDHYRY 473          
The following BLAST results are available for this feature:
BLAST of CF835206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
SAHH_METEP2.027e-1457.35Adenosylhomocysteinase OS=Methylobacterium extorqu... [more]
SAHH_METC42.027e-1457.35Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_RHIE62.648e-1458.82Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_METCA2.648e-1458.82Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_SYNSC4.516e-1454.41Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_SYNS34.516e-1457.35Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_PLACH4.516e-1455.88Adenosylhomocysteinase OS=Plasmodium chabaudi GN=P... [more]
SAHH_RHIEC5.898e-1457.35Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_COREF5.898e-1458.82Adenosylhomocysteinase OS=Corynebacterium efficien... [more]
SAHH_BRASB5.898e-1454.41Adenosylhomocysteinase OS=Bradyrhizobium sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835206 ID=CF835206; Name=CF835206; organism=Citrus sinensis; type=EST; length=591bp
TTTTTTTTTTTTTTTTTCATAATGATTTTTCATTTAAATAAGAAACTGCG
TATAAAGATTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGA
TAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCACCAAATACAAA
ATAATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCT
TCAAGCAAGGGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCC
AAACACACACTACTACGAAATTTAAACCTAACATCCTACTACAGATCATC
ATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACA
TTCACTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGCGA
AGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTACTCAGCCTGCTC
CTTGGGGAGCCTGGTGAGCTTACCTCCAAGTTTGCCAAGGTGAAAAGCAG
CAACCTTTTCATCGAGGTGCTTGGGCAAAACGCACACCTTCTTCTCGTAC
TTGCCGGTGCTCTTCTCCTTCCAAAACTCAAGCTGGGCAAT
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