CF835206

Overview
NameCF835206
Unique NameCF835206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835206_ssr356 microsatellite CF835206_ssr356:356..379. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1381..1965. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_BURXL (Adenosylhomocysteinase OS=Burkholderia xenovorans (strain LB400) GN=ahcY PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-13
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E + + +  KYE KV VLPKHLDEKVA  HL ++G  LT L  EQA YI V  +GP+KP  YRY
Sbjct:  408 LAQIELFTQGN--KYENKVYVLPKHLDEKVARLHLARIGANLTVLSDEQAGYIGVDKNGPFKPNHYRY 473
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_ANOGA (Adenosylhomocysteinase OS=Anopheles gambiae GN=Ahcy13 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-13
Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W  +   +Y   V VLPK LDE+VAA HL KLG KLT+L   QAEY+++ A+GPYKP  YRY
Sbjct:  367 LAQIELWTNRE--QYAIGVHVLPKKLDEEVAALHLDKLGVKLTKLSARQAEYLNLPAEGPYKPEHYRY 432
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_ROSDO (Adenosylhomocysteinase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W       Y+ +V +LPKHLDEKVA  HL ++G KLT L  EQA YI V  +GP+KP  YRY
Sbjct:  397 LAQIELWTRADA--YDNEVYILPKHLDEKVARLHLDRIGVKLTPLDPEQAAYIGVKPEGPFKPEHYRY 462
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_PROMM (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E + +    +Y  +V VLPKHLDE VA  HL K+G +LT L K+QA+YISV  +GPYKP  YRY
Sbjct:  411 LAQIELFSKGD--QYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISVPVEGPYKPDHYRY 476
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_PROMA (Adenosylhomocysteinase OS=Prochlorococcus marinus GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E +K+  +  Y+  V VLPKHLDE VA  HL K+G  LT L KEQA+YI+V  +GPYK  +YRY
Sbjct:  411 LAQIELFKKGDS--YQNNVYVLPKHLDEMVARLHLDKIGANLTELSKEQADYINVPIEGPYKSEQYRY 476
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_MARMM (Adenosylhomocysteinase OS=Maricaulis maris (strain MCS10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W +     Y  +V +LPKHLDEKVAA HL KLG KLT L  EQA+YI V   GP+K   YRY
Sbjct:  404 LAQIELWTKGEN--YTNEVYILPKHLDEKVAALHLDKLGAKLTVLSDEQADYIGVPQHGPFKAEHYRY 469
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_LEIDO (Adenosylhomocysteinase OS=Leishmania donovani PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKK----VCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E W  +  GKY +     V  LPK LDEKVAA HL  +G KLT+L  +QAEYI+   +GP+KP  YRY
Sbjct:  366 LAQIELWSNRDNGKYPRGDKAGVFFLPKALDEKVAALHLAHVGAKLTKLTPKQAEYINCPVNGPFKPDHYRY 437
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_CORGL (Adenosylhomocysteinase OS=Corynebacterium glutamicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E ++ +  G+YE +V  LPK LDEKVA  H+  LGG+LT L KEQAEYI V   GP+KP  YRY
Sbjct:  409 IAQIELFQNE--GQYENEVYRLPKVLDEKVARIHVEALGGQLTELTKEQAEYIGVDVAGPFKPEHYRY 474
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_CORGB (Adenosylhomocysteinase OS=Corynebacterium glutamicum (strain R) GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E ++ +  G+YE +V  LPK LDEKVA  H+  LGG+LT L KEQAEYI V   GP+KP  YRY
Sbjct:  413 IAQIELFQNE--GQYENEVYRLPKVLDEKVARIHVEALGGQLTELTKEQAEYIGVDVAGPFKPEHYRY 478
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPW (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH7803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13
Identity = 36/68 (52.94%), Postives = 50/68 (73.53%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            +AQ+E + + +  +Y K+V VLPKHLDE VA  HL ++G KLT L K+QA+YI+V  +GP+KP  YRY
Sbjct:  411 LAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPFKPDHYRY 476
The following BLAST results are available for this feature:
BLAST of CF835206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
SAHH_BURXL1.314e-1355.88Adenosylhomocysteinase OS=Burkholderia xenovorans ... [more]
SAHH_ANOGA1.314e-1355.88Adenosylhomocysteinase OS=Anopheles gambiae GN=Ahc... [more]
SAHH_ROSDO1.716e-1352.94Adenosylhomocysteinase OS=Roseobacter denitrifican... [more]
SAHH_PROMM1.716e-1354.41Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PROMA1.716e-1354.41Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_MARMM1.716e-1355.88Adenosylhomocysteinase OS=Maricaulis maris (strain... [more]
SAHH_LEIDO1.716e-1351.39Adenosylhomocysteinase OS=Leishmania donovani PE=3... [more]
SAHH_CORGL1.716e-1357.35Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_CORGB1.716e-1357.35Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_SYNPW2.241e-1352.94Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835206 ID=CF835206; Name=CF835206; organism=Citrus sinensis; type=EST; length=591bp
TTTTTTTTTTTTTTTTTCATAATGATTTTTCATTTAAATAAGAAACTGCG
TATAAAGATTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGA
TAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCACCAAATACAAA
ATAATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCT
TCAAGCAAGGGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCC
AAACACACACTACTACGAAATTTAAACCTAACATCCTACTACAGATCATC
ATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACA
TTCACTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGCGA
AGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTACTCAGCCTGCTC
CTTGGGGAGCCTGGTGAGCTTACCTCCAAGTTTGCCAAGGTGAAAAGCAG
CAACCTTTTCATCGAGGTGCTTGGGCAAAACGCACACCTTCTTCTCGTAC
TTGCCGGTGCTCTTCTCCTTCCAAAACTCAAGCTGGGCAAT
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