CF835207

Overview
NameCF835207
Unique NameCF835207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1840 contig Csv1_Contig1840:24..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_CUPTR (Adenosylhomocysteinase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.538e-46
Identity = 89/138 (64.49%), Postives = 107/138 (77.54%), Query Frame = 2
Query:  158 DLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 571
            D++ A +GR EI +AE EMPGLMA R EF  +QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCN+  TQDHAAAAI      VFA+KGE+L+EYW  T +  DW  GG P++I+DDGGDATLL+H G +AE+
Sbjct:   15 DINLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAFKGESLKEYWDFTHRIFDWADGGTPNMILDDGGDATLLLHLGARAEK 152          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.009e-46
Identity = 93/152 (61.18%), Postives = 113/152 (74.34%), Query Frame = 2
Query:  116 SVEKSASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 571
            +V  +AS  + K  DLS A +GR EI +AE EMPGLMA R E+  +QP KGA+I GSLHMTIQTAVLIETL ALGAEVRW SCN+  TQDHAAAAI  D   VFA+KGE+L +YW  T + L+W    GP++I+DDGGDATLL+  G +AE+
Sbjct:    3 AVANAASFDDHKVADLSLAGWGRKEIAIAETEMPGLMAIREEYRAAQPLKGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAADGIPVFAYKGESLDDYWEYTHRILEWPGDVGPNMILDDGGDATLLVTLGARAEK 154          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_SYNSC (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9605) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.623e-46
Identity = 89/138 (64.49%), Postives = 106/138 (76.81%), Query Frame = 2
Query:  158 DLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 571
            D++ ADFGR E+++AE EMPGLMA R ++G  +P KGA+I GSLHMTIQTAVLIETL  LGAEVRW SCN+  TQDHAAAAI      VFA KGETL+EYW  T   L+WG GG P++I+DDGGDAT L+  G KAE+
Sbjct:   21 DINLADFGRKELDIAETEMPGLMALREKYGSEKPLKGARIAGSLHMTIQTAVLIETLVELGAEVRWASCNIFSTQDHAAAAIAAKGIPVFAVKGETLEEYWDYTHSILEWGDGGSPNMILDDGGDATGLVMLGSKAEQ 158          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_RHILW (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.623e-46
Identity = 89/143 (62.24%), Postives = 108/143 (75.52%), Query Frame = 2
Query:  140 REFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 568
            +++   D+  ADFGR EI +AE EMPGLM+CR EFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCN+  TQDHAAAAI      VFA KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRTEFGQAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE 147          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_ACIAC (Adenosylhomocysteinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.623e-46
Identity = 92/142 (64.79%), Postives = 111/142 (78.17%), Query Frame = 2
Query:  158 DLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWG----PGGGPDLIVDDGGDATLLIHEGVKAEE 571
            D+S AD+GR EI++AE EMPGLMA R EF  +QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCN+  TQDHAAAAI      VFA KGE+L++YW  T +  D+G    PG GP++I+DDGGDATLL+H G +AE+
Sbjct:   15 DISLADWGRKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAIKGESLEDYWDYTHRIFDFGAKGTPGEGPNMILDDGGDATLLMHLGQRAEK 156          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_OCHA4 (Adenosylhomocysteinase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.426e-46
Identity = 91/145 (62.76%), Postives = 110/145 (75.86%), Query Frame = 2
Query:  134 SGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 568
            + ++F  +DLS AD+GR E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL ALGAEVRW SCN+  TQDHAAAAI      VFA KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE
Sbjct:    3 ASQDFVVKDLSLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLQALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAE 147          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.426e-46
Identity = 94/162 (58.02%), Postives = 115/162 (70.99%), Query Frame = 2
Query:  134 SGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAI---------GRDSASVFAWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGVKAEEIYEKTG 589
            +G +FK  DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCN+  TQDHAAAA+               VFAWKGE+L+EYWWC E+ L W     P ++I+DDGGDAT+L+  G++    YEK G
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEEYWWCAEQMLTWPDSDKPANMILDDGGDATMLVLRGMQ----YEKAG 171          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.426e-46
Identity = 94/162 (58.02%), Postives = 115/162 (70.99%), Query Frame = 2
Query:  134 SGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAI---------GRDSASVFAWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGVKAEEIYEKTG 589
            +G +FK  DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCN+  TQDHAAAA+               VFAWKGE+L+EYWWC E+ L W     P ++I+DDGGDAT+L+  G++    YEK G
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEEYWWCAEQMLTWPDSDKPANMILDDGGDATMLVLRGMQ----YEKAG 171          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_METPP (Adenosylhomocysteinase OS=Methylibium petroleiphilum (strain PM1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.426e-46
Identity = 93/142 (65.49%), Postives = 110/142 (77.46%), Query Frame = 2
Query:  158 DLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDWG----PGGGPDLIVDDGGDATLLIHEGVKAEE 571
            DLS AD+GR EI++AE EMPGLMA R EF  SQP KGA+ITGSLHMTIQTAVL+ETL ALGA+VRW SCN+  TQDHAAAA+      VFA+KGETL +YW  T +  D+G     G GP++I+DDGGDATLL+H G KAE+
Sbjct:   17 DLSLADWGRKEIKIAETEMPGLMAIRQEFAASQPLKGARITGSLHMTIQTAVLVETLQALGAQVRWASCNIFSTQDHAAAALVAAGTPVFAYKGETLTDYWDYTHRIFDFGAKGTDGEGPNMILDDGGDATLLMHLGQKAEK 158          
BLAST of CF835207 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFT (Adenosylhomocysteinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.475e-46
Identity = 91/152 (59.87%), Postives = 113/152 (74.34%), Query Frame = 2
Query:  125 KSASGREFKGEDLSXADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNVGGTQDHAAAAIGRDSASVFAWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAE 568
            +++    +K  D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCN+  TQDHAAAAI      VFAWKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G + E
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKGYELE 157          
The following BLAST results are available for this feature:
BLAST of CF835207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_CUPTR1.538e-4664.49Adenosylhomocysteinase OS=Cupriavidus taiwanensis ... [more]
SAHH_METCA2.009e-4661.18Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_SYNSC2.623e-4664.49Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_RHILW2.623e-4662.24Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_ACIAC2.623e-4664.79Adenosylhomocysteinase OS=Acidovorax avenae subsp.... [more]
SAHH_OCHA43.426e-4662.76Adenosylhomocysteinase OS=Ochrobactrum anthropi (s... [more]
SAHH_MYCUA3.426e-4658.02Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCMM3.426e-4658.02Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]
SAHH_METPP3.426e-4665.49Adenosylhomocysteinase OS=Methylibium petroleiphil... [more]
SAHH_XYLFT4.475e-4659.87Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06N13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835207 ID=CF835207; Name=CF835207; organism=Citrus sinensis; type=EST; length=593bp
CGTTTAGGTTGTACATCATTCACTTTGTTTGGTTAGTTCCCCTAGAGAGA
GNAGATTGCCCTCTCTTCCTTCTTTCTTTTAGATCTATCAATACTATTAA
TCAACCATGGCTTTGTCCGTCGAGAAATCCGCTAGCGGTCGTGAATTCAA
GGGGGAGGATCTGTCCCANGCTGACTTCGGCCGCCTCGAAATCGAGTTGG
CCGAAGTCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCT
TCACAGCCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCAT
CCAGACGGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGCCGAAGTCC
GCTGGTGCTCCTGCAACGTGGGGGGAACCCAAGACCACGCGGCCGCCGCC
ATCGGGCGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCA
GGAGTACTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCG
GCCCAGATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCAC
GAGGGAGTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGT
back to top