CF835211
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835211 vs. ExPASy Swiss-Prot
Match: RLA1_HUMAN (60S acidic ribosomal protein P1 OS=Homo sapiens GN=RPLP1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.521e-13 Identity = 43/109 (39.45%), Postives = 51/109 (46.79%), Query Frame = 3 Query: 66 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 380 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + SDDDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
BLAST of CF835211 vs. ExPASy Swiss-Prot
Match: RLA1_BOVIN (60S acidic ribosomal protein P1 OS=Bos taurus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.521e-13 Identity = 43/109 (39.45%), Postives = 51/109 (46.79%), Query Frame = 3 Query: 66 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 380 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + SDDDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
BLAST of CF835211 vs. ExPASy Swiss-Prot
Match: RLA1_ALTAL (60S acidic ribosomal protein P1 OS=Alternaria alternata GN=ALTA12 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.112e-12 Identity = 41/110 (37.27%), Postives = 57/110 (51.82%), Query Frame = 3 Query: 54 LMAGEQACTYATLILHDDGIAVTAEKIAALVKAANV-QIESYWPSLFAKLAEKKNLDDLILNVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 380 + E A +YA LIL DDG+ +TA+K+ +L+KAA + ++E W +LFAK E K++ DL+LNVGS SD+DMGF LFD Sbjct: 1 MSTSELATSYAALILADDGVDITADKLQSLIKAAKIEEVEPIWTTLFAKALEGKDVKDLLLNVGSGGGAAPLPEALLLRWRAADAAPAAEEKKEEEKEESDEDMGFGLFD 110
BLAST of CF835211 vs. ExPASy Swiss-Prot
Match: RLA1_RAT (60S acidic ribosomal protein P1 OS=Rattus norvegicus GN=Rplp1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12 Identity = 42/109 (38.53%), Postives = 51/109 (46.79%), Query Frame = 3 Query: 66 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 380 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + S+DDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSAAAAPAEEKKVEAKKEESEESEDDMGFGLFD 114
BLAST of CF835211 vs. ExPASy Swiss-Prot
Match: RLA1_MOUSE (60S acidic ribosomal protein P1 OS=Mus musculus GN=Rplp1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12 Identity = 42/109 (38.53%), Postives = 51/109 (46.79%), Query Frame = 3 Query: 66 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 380 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + S+DDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGAAPSTAAAPAEEKKVEAKKEESEESEDDMGFGLFD 114
BLAST of CF835211 vs. ExPASy Swiss-Prot
Match: RLA1_OSCBR (60S acidic ribosomal protein P1 OS=Oscheius brevesophaga GN=rpl-21 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12 Identity = 41/107 (38.32%), Postives = 53/107 (49.53%), Query Frame = 3 Query: 66 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNV--GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 380 E AC YA LIL DD +A+T +KIA L+KAAN++ E +WP LFAK E ++ +LI +V G+ SDDDMGF L D Sbjct: 6 ELACVYAALILQDDEVAITGDKIATLLKAANIEFEPFWPGLFAKALEGVDVKNLITSVSSGASAGPAQAAAAAPAGGAPAAAAPAESKEGRRSQGESDDDMGFGLLD 112
BLAST of CF835211 vs. ExPASy Swiss-Prot
Match: RLA1_CHICK (60S acidic ribosomal protein P1 OS=Gallus gallus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12 Identity = 42/109 (38.53%), Postives = 51/109 (46.79%), Query Frame = 3 Query: 66 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNV----GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 380 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK ++ LI NV G+ SDDDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICNVGAGGGAPAAAAPAGGAAPAGGGAAPAEEKKEEEKKEESEESDDDMGFGLFD 114
BLAST of CF835211 vs. ExPASy Swiss-Prot
Match: RLA3_SCHPO (60S acidic ribosomal protein P1-alpha 3 OS=Schizosaccharomyces pombe GN=rpa3 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 40/110 (36.36%), Postives = 57/110 (51.82%), Query Frame = 3 Query: 54 LMAGEQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 380 + A E A +Y+ LIL D+GI +T++K+ +L KAANV +E W ++FAK E K+L +L+LN+GS SD+DMGF LFD Sbjct: 1 MSASELATSYSALILADEGIEITSDKLLSLTKAANVDVEPIWATIFAKALEGKDLKELLLNIGSAAAAPAAGGAGAPAAAAGGEAAAEEQKEEAKEEEESDEDMGFGLFD 110
BLAST of CF835211 vs. ExPASy Swiss-Prot
Match: RLA1_DICDI (60S acidic ribosomal protein P1 OS=Dictyostelium discoideum GN=rplp1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 3 Query: 66 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 380 E AC Y+ L+L DDGI +TA+KI L++AAN+ + S+WP L+A+ K N+ +L+LN G S SDDDMG LFD Sbjct: 8 ELACIYSGLLLQDDGIEITADKIKTLLEAANITVASHWPGLYARSLAKVNIPELLLNAGSSGAAGAAPVAAATSAAAPAAAAKKETKKEEVKKEESDDDMGMGLFD 113
BLAST of CF835211 vs. ExPASy Swiss-Prot
Match: RLA1_ARTSA (60S acidic ribosomal protein P1 OS=Artemia salina PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 38/105 (36.19%), Postives = 48/105 (45.71%), Query Frame = 3 Query: 66 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 380 E AC YA LIL DD + +T EK+ +++AA V +E YWP LF K E +L +I NVGS D+DMGF LFD Sbjct: 6 ELACVYAALILLDDDVDITTEKVNTILRAAGVSVEPYWPGLFTKALEGLDLKSMITNVGSGVGAAPAAGGAAAATEAPAAKEEKKEEKKEESEEEDEDMGFGLFD 110 The following BLAST results are available for this feature:
BLAST of CF835211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835211 ID=CF835211; Name=CF835211; organism=Citrus sinensis; type=EST; length=594bpback to top |