CF835214

Overview
NameCF835214
Unique NameCF835214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835214 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.684e-13
Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = -2
Query:  237 FEFIPFGAGRRICPGMSFGLASVELPLAMLLFHFDWKLPNGMKHGDLDMTEAFAPAVRRKQDLCMIPIPYH 449
            FE +PFG+GRRICPGM+ G+ +VEL L  LL+ FDW +P G    D+++ E  +  + +K  L ++P+ +H
Sbjct:  434 FELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLELVPLVHH 504          
BLAST of CF835214 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.277e-12
Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = -2
Query:  243 FEFIPFGAGRRICPGMSFGLASVELPLAMLLFHFDWKLPNGMKHGDLDMTEAFAPAVRRKQDLCMIPIP 449
            F+ IPFGAGRRICPG+      V + L  LL +FDWK+   + +  LDMTE     + + + LC++PIP
Sbjct:  420 FDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPLCVVPIP 488          
BLAST of CF835214 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.826e-11
Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = -2
Query:  234 FEFIPFGAGRRICPGMSFGLASVELPLAMLLFHFDWKLPNGMKHGDLDMTEAFAPAVRRKQDLCMIPIPYHP 449
            FE IPFGAGRRIC G   G ASVE  L  L+  FDWKLP+G+   +++M E+F  A+++K  L  I  P  P
Sbjct:  448 FELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDGVV--EVNMEESFGIALQKKVPLSAIVTPRLP 517          
BLAST of CF835214 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.826e-11
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = -2
Query:  246 FEFIPFGAGRRICPGMSFGLASVELPLAMLLFHFDWKLPNGMKHGDLDMTEAFAPAVRRKQDLCMIPI 449
            FE +PFG+GRRICPG++  +A++EL L  LL+ FDW +P   K  D+DM EA    V +K  L ++P+
Sbjct:  434 FELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPE--KKKDMDMEEAGDLTVDKKVPLELLPV 499          
The following BLAST results are available for this feature:
BLAST of CF835214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
C71B7_ARATH9.684e-1343.66Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU6.277e-1244.937-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C75A6_CAMME1.826e-1150.00Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71B4_ARATH1.826e-1147.06Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835214 ID=CF835214; Name=CF835214; organism=Citrus sinensis; type=EST; length=450bp
TTTTTTTTTTTTTTTTTCCAACCATGAAAATATTACCCTTTTTATTTTAT
CCAAAAAAAAAGTAAAACTTATGGAGAGCCTTAAACAGAGAGAAACAAAA
GTGTACACCATGAATTTAAATCTCAGGAACCAGCAAAGGTCTACAAAAAC
AAAAAGAGTTTCAGAGACAGTTGATAACAAATACTAATAAGAATAATAAT
AAAATTTTCCTTTAGTTCTTATGCAACAAATGAAGGATGGTAAGGAATAG
GAATCATGCACAAATCTTGTTTTCTTCTTACTGCCGGGGCAAAGGCCTCG
GTCATGTCCAAATCTCCATGCTTCATACCATTTGGAAGTTTCCAGTCAAA
ATGGAATAATAGCATCGCCAGGGGAAGTTCCACGCTGGCCAAACCAAATG
ACATTCCAGGGCATATCCTCCTACCAGCTCCAAATGGTATGAATTCAAAA
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