CF835216

Overview
NameCF835216
Unique NameCF835216
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length504
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2871 contig Csv1_Contig2871:680..1183. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835216 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 5.486e-43
Identity = 82/110 (74.55%), Postives = 96/110 (87.27%), Query Frame = -2 
Query:  174 LNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 503
            L NGE+EK  N+SIFQKIA FE+ELKT+LPKEVE+AR   ENG+ TI N+IKECRSYPLY+ VREELG++ LTGEKV SPGEE DK+FTA+CQGKIIDP+LECL +WNGA
Sbjct:  610 LVNGESEKNLNTSIFQKIATFEDELKTLLPKEVESARGAYENGNTTISNKIKECRSYPLYKFVREELGTSLLTGEKVISPGEECDKLFTAICQGKIIDPLLECLGDWNGA 719
[Close]
BLAST of CF835216 vs. ExPASy Swiss-Prot
Match: PALY_MEDSA (Phenylalanine ammonia-lyase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.165e-43
Identity = 82/110 (74.55%), Postives = 94/110 (85.45%), Query Frame = -2 
Query:  174 LNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 503
            L NGE+EK  N+SIFQKIA FEEELKT+LPKEVE+AR   E+G+PTIPN+I  CRSYPLY+ VREELG+  LTGE V SPGEE DK+F+AMCQGKIIDP+LECL EWNGA
Sbjct:  611 LVNGESEKNFNTSIFQKIATFEEELKTLLPKEVESARTAYESGNPTIPNKINGCRSYPLYKFVREELGTGLLTGENVISPGEECDKLFSAMCQGKIIDPLLECLGEWNGA 720
[Close]
BLAST of CF835216 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.222e-42
Identity = 79/110 (71.82%), Postives = 95/110 (86.36%), Query Frame = -2 
Query:  174 LNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 503
            L NG+NE+  N+SIFQKIA FE+ELK +LPKEVE+AR  +E+G+P IPNRI+ECRSYPLY+ VR+ELG  +LTGEKVTSPGEEFDKVF AM +G+IIDP+LECL  WNGA
Sbjct:  602 LKNGDNERNMNTSIFQKIATFEDELKALLPKEVESARAALESGNPAIPNRIEECRSYPLYKFVRKELGIEYLTGEKVTSPGEEFDKVFIAMSKGEIIDPLLECLESWNGA 711
[Close]
BLAST of CF835216 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.222e-42
Identity = 80/110 (72.73%), Postives = 94/110 (85.45%), Query Frame = -2 
Query:  174 LNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 503
            + NGE+EK  NSSIFQKI AFE+EL  VLPKEVE+AR  +E+G+P+IPNRI ECRSYPLYRLVR+ELG+  LTGEKV SPGEE +KVFTAMC G+I DP+LECL+ WNGA
Sbjct:  606 MKNGESEKNINSSIFQKIGAFEDELNAVLPKEVESARALLESGNPSIPNRITECRSYPLYRLVRQELGTELLTGEKVRSPGEEIEKVFTAMCNGQINDPLLECLKSWNGA 715
[Close]
BLAST of CF835216 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.085e-42
Identity = 82/110 (74.55%), Postives = 91/110 (82.73%), Query Frame = -2 
Query:  174 LNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 503
            L N E EK  NSSIFQKIA FEEELK +LPKEVE AR   E+G   IPN+I+ECRSYPLY+ VREELG+  LTGEKV SPGEEFDK+FTAMCQGKIIDP++ECL EWNGA
Sbjct:  599 LVNAECEKDVNSSIFQKIAIFEEELKNLLPKEVEGARAAYESGKAAIPNKIQECRSYPLYKFVREELGTGLLTGEKVRSPGEEFDKLFTAMCQGKIIDPLMECLGEWNGA 708
[Close]
BLAST of CF835216 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.085e-42
Identity = 81/110 (73.64%), Postives = 92/110 (83.64%), Query Frame = -2 
Query:  174 LNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 503
            L NGENEK   +SIF K+AAFE+ELK VLPKEVE AR  VE+G+P IPNRIKECRSYPLY+ VRE LG+  LTGEKV SPGEE DKVFTAMC+G IIDP+LECL+ W+GA
Sbjct:  593 LQNGENEKNTGTSIFLKVAAFEDELKAVLPKEVEAARIAVESGNPAIPNRIKECRSYPLYKFVREGLGTELLTGEKVRSPGEECDKVFTAMCEGSIIDPLLECLKSWDGA 702
[Close]
BLAST of CF835216 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.723e-42
Identity = 81/110 (73.64%), Postives = 95/110 (86.36%), Query Frame = -2 
Query:  174 LNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 503
            L NGE+EK +N+SIFQKIA FEEELKT+LPKEVE+AR   ENG+ TI N+I  CRSYPLY+ VREELG++ LTGE+V SPGEE DK+FTAMCQGKIIDP+L+CL EWNGA
Sbjct:  611 LVNGESEKNSNTSIFQKIATFEEELKTLLPKEVESARTAYENGNSTIANKINGCRSYPLYKFVREELGTSLLTGERVISPGEECDKLFTAMCQGKIIDPLLKCLGEWNGA 720
[Close]
BLAST of CF835216 vs. ExPASy Swiss-Prot
Match: PAL2_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.723e-42
Identity = 80/110 (72.73%), Postives = 92/110 (83.64%), Query Frame = -2 
Query:  174 LNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 503
            L NGE+EK  ++SIFQKIAAFE+ELK VLPKEVE AR  +ENG+P IPNRI ECRSYPLY+ VREELG+  LTGEKV SPGE  DKVFTA+C G IIDP+LECL+ W+GA
Sbjct:  594 LQNGEHEKNVSTSIFQKIAAFEDELKAVLPKEVEGARSAIENGNPAIPNRITECRSYPLYKFVREELGTEMLTGEKVKSPGEVCDKVFTAVCDGGIIDPLLECLKSWDGA 703
[Close]
BLAST of CF835216 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.723e-42
Identity = 79/110 (71.82%), Postives = 95/110 (86.36%), Query Frame = -2 
Query:  174 LNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 503
            L NGENEK A++SIFQKI AFEEELK +LPKEV++AR  +++GS  +PNRI ECRSYPLY+ VREELG+ +LTGEKV SPGEE DKVFTA+C+GKIIDP+L+CL  WNGA
Sbjct:  603 LTNGENEKNASTSIFQKIVAFEEELKVLLPKEVDSARAALDSGSAGVPNRITECRSYPLYKFVREELGAEYLTGEKVRSPGEECDKVFTAICEGKIIDPILDCLEGWNGA 712
[Close]
BLAST of CF835216 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.066e-42
Identity = 77/110 (70.00%), Postives = 96/110 (87.27%), Query Frame = -2 
Query:  174 LNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 503
            L NG+NE+  ++SIFQKIA FE+ELK +LPKEVE+AR  +E+G+P IPNRI+ECRSYPLY+ VR+ELG+ +LTGEKVTSPGEEF+KVF AM +G+IIDP+LECL  WNGA
Sbjct:  602 LKNGDNERNLSTSIFQKIATFEDELKALLPKEVESARAALESGNPAIPNRIEECRSYPLYKFVRKELGTEYLTGEKVTSPGEEFEKVFIAMSKGEIIDPLLECLESWNGA 711
The following BLAST results are available for this feature:
BLAST of CF835216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PAL2_PEA5.486e-4374.55Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PALY_MEDSA7.165e-4374.55Phenylalanine ammonia-lyase OS=Medicago sativa PE=... [more]
PAL2_PETCR1.222e-4271.82Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]
PAL1_SOLTU1.222e-4272.73Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PAL1_SOYBN2.085e-4274.55Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PAL1_IPOBA2.085e-4273.64Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PALY_TRISU2.723e-4273.64Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PAL2_IPOBA2.723e-4272.73Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=... [more]
PAL1_PRUAV2.723e-4271.82Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]
PAL1_PETCR6.066e-4270.00Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835216 ID=CF835216; Name=CF835216; organism=Citrus sinensis; type=EST; length=504bp
AAAGGACAATAAGTCTTATAACCTTATATGAAAAAACCAATAGAAGTGAT
TGAAATATTACAGATGAATTTGTACCACTGACTCGCATGGGCAAATTCTA
TGAACACAAGAACACAAGGGATTGAAGACCGTGTTATTAAACAAAATAAA
AACAACTAACAAATTGGAAGAGGGGCGCCATTCCATTCCCTGAGACATTC
CAGCATTGGATCAATGATCTTGCCCTGGCACATTGCTGTAAACACTTTGT
CAAATTCCTCGCCGGGCGATGTAACTTTTTCCCCTGTTAGAAAATTAGAC
CCGAGCTCCTCCCTCACTAACCTGTACAAAGGGTAAGACCTGCATTCTTT
GATCCTGTTGGGAATTGTTGGACTTCCATTCTCAACAGTCTGCCTGGCGT
TCTCAACTTCTTTGGGCAAAACGGTTTTCAATTCCTCCTCAAAGGCTGCA
ATCTTCTGGAAGATTGAAGAGTTGGCAGTCTTCTCGTTCTCTCCATTGTT
CAGT
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