CF835226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.965e-26 Identity = 57/99 (57.58%), Postives = 73/99 (73.74%), Query Frame = -3 Query: 328 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEE 624 +RE+GLTFH K VP I++N+E L +AF P GISDWNSI W+ HPGG AI++ VE +A+R VLSEYGN++SACVLFILDE+RKKS ++ Sbjct: 266 VREMGLTFHCSKAVPTFITQNVEDCLVKAFEPYGISDWNSIFWVLHPGGNAIVEGVEETLGLAPEKLRASRDVLSEYGNLTSACVLFILDEVRKKSKKD 364
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.378e-26 Identity = 57/99 (57.58%), Postives = 72/99 (72.73%), Query Frame = -3 Query: 328 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEE 624 +RE+GLTFH K VP I++N+E L +AF P GISDWNSI W+ HPGG AI+D VE +A+R VLS YGN++SACVLFILDE+RKKS ++ Sbjct: 264 VREMGLTFHCSKAVPTFITQNVEDCLVKAFEPYGISDWNSIFWVLHPGGNAIVDGVEETLGLAPEKLRASRDVLSGYGNLTSACVLFILDEVRKKSKKD 362
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23 Identity = 54/87 (62.07%), Postives = 63/87 (72.41%), Query Frame = -3 Query: 364 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLF 624 LRE+GLTFH K VP LI++NIE L +AF P GISDWNSI WI HPGG AILD VE +A+R VLS+YGN++SACVLF Sbjct: 264 LREMGLTFHCSKAVPSLITQNIEDCLVKAFEPFGISDWNSIFWILHPGGNAILDGVEEKLGLEPEKLRASRDVLSQYGNLTSACVLF 350
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.486e-21 Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = -3 Query: 373 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSAC 624 LRE+GLTFH K VP LI++N+E L +AF P GISDWNSI WI HPGG AILD+VE +A+R VLSE GN++SAC Sbjct: 261 LREMGLTFHCSKAVPSLITQNVEDYLVKAFEPFGISDWNSIFWILHPGGIAILDRVEEKLGLEPEKLRASRDVLSESGNLTSAC 344
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS4_TRISU (Chalcone synthase 4 (Fragment) OS=Trifolium subterraneum GN=CHS4 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.104e-20 Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = -3 Query: 463 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILD 624 LRE GLTFHLLKDVPG++SKNI+K+L EAF PLGISD+NSI WIAHPGGPAILD Sbjct: 258 LREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILD 311 The following BLAST results are available for this feature:
BLAST of CF835226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835226 ID=CF835226; Name=CF835226; organism=Citrus sinensis; type=EST; length=626bpback to top |