CF835226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS6_SORBI (Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.395e-56 Identity = 107/132 (81.06%), Postives = 116/132 (87.88%), Query Frame = -3 Query: 229 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 624 LREVGLTFHLLKDVPGLISKNIE+SL EAF PLGI+D+NSI W+AHPGGPAILDQVE+ +ATR VLSEYGNMSSACVLFILDEMRK+S E+ +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI Sbjct: 262 LREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLKKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.395e-56 Identity = 107/132 (81.06%), Postives = 116/132 (87.88%), Query Frame = -3 Query: 229 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 624 LREVGLTFHLLKDVPGLISKNIE+SL EAF PLGI+D+NSI W+AHPGGPAILDQVE+ +ATR VLSEYGNMSSACVLFILDEMRK+S E+ +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI Sbjct: 262 LREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS3_SORBI (Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.395e-56 Identity = 107/132 (81.06%), Postives = 116/132 (87.88%), Query Frame = -3 Query: 229 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 624 LREVGLTFHLLKDVPGLISKNIE+SL EAF PLGI+D+NSI W+AHPGGPAILDQVE+ +ATR VLSEYGNMSSACVLFILDEMRK+S E+ +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI Sbjct: 262 LREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERLRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHSY_MATIN (Chalcone synthase OS=Matthiola incana GN=CHS PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.380e-56 Identity = 108/132 (81.82%), Postives = 114/132 (86.36%), Query Frame = -3 Query: 229 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 624 LREVGLTFHLLKDVPGLISKNIEKSL EAF PLGISDWNS+ WIAHPGGPAILDQVE +ATR VLSEYGNMSSACVLFILDEMRKKS ++ ATTGEGL+WGVLFGFGPGLTVETVVL SVP+ Sbjct: 263 LREVGLTFHLLKDVPGLISKNIEKSLEEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAQDGVATTGEGLEWGVLFGFGPGLTVETVVLRSVPL 394
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.380e-56 Identity = 107/132 (81.06%), Postives = 114/132 (86.36%), Query Frame = -3 Query: 229 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 624 LREVGLTFHLLKDVPGLISKNIEKSL EAF PLGISDWNS+ WIAHPGGPAILDQVE +ATR V+ EYGNMSSACVLFILDEMRKKS ++ ATTGEGL+WGVLFGFGPGLTVETVVLHSVP+ Sbjct: 264 LREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKEEKMRATRHVMREYGNMSSACVLFILDEMRKKSAKDGVATTGEGLEWGVLFGFGPGLTVETVVLHSVPL 395
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS2_SORBI (Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.108e-56 Identity = 106/132 (80.30%), Postives = 116/132 (87.88%), Query Frame = -3 Query: 229 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 624 LREVGLTFHLLKDVPGLISKNIE+SL EAF PLGI+D+NSI W+AHPGGPAILDQVE+ +ATR VLSEYGNMSSACVLFILDEMRK+S E+ +ATTGEG +WGVLFGFGPGLTVETVVLHSVPI Sbjct: 262 LREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGRATTGEGFEWGVLFGFGPGLTVETVVLHSVPI 393
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS1_MAIZE (Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.108e-56 Identity = 105/132 (79.55%), Postives = 115/132 (87.12%), Query Frame = -3 Query: 229 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 624 LREVGL FHLLKDVPGLISKNIE++L +AF PLGISDWNSI W+AHPGGPAILDQVE+ +ATR VLSEYGNMSSACVLFILDEMRK+ E+ ++TTGEGLDWGVLFGFGPGLTVETVVLHSVPI Sbjct: 261 LREVGLAFHLLKDVPGLISKNIERALEDAFEPLGISDWNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRPAEDGQSTTGEGLDWGVLFGFGPGLTVETVVLHSVPI 392
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHSY_ARATH (Chalcone synthase OS=Arabidopsis thaliana GN=CHS PE=1 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 5.302e-56 Identity = 107/132 (81.06%), Postives = 114/132 (86.36%), Query Frame = -3 Query: 229 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 624 LREVGLTFHLLKDVPGLISKNI KSL EAF PLGISDWNS+ WIAHPGGPAILDQVE +ATR VLSEYGNMSSACVLFILDEMR+KS ++ ATTGEGL+WGVLFGFGPGLTVETVVLHSVP+ Sbjct: 264 LREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKEEKMRATRHVLSEYGNMSSACVLFILDEMRRKSAKDGVATTGEGLEWGVLFGFGPGLTVETVVLHSVPL 395
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 6.925e-56 Identity = 106/132 (80.30%), Postives = 115/132 (87.12%), Query Frame = -3 Query: 229 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 624 LREVGLTFHLLKDVPGLISKN+EKSL+EAF PLGISDWNS+ WIAHPGGPAILDQVE+ +ATR VLSEYGNMSSACVLFILDEMR+KS E+ TTGEG++WGVLFGFGPGLTVETVVLHSV I Sbjct: 258 LREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLSLKPEKLRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLKTTGEGIEWGVLFGFGPGLTVETVVLHSVAI 389
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 6.925e-56 Identity = 109/130 (83.85%), Postives = 113/130 (86.92%), Query Frame = -3 Query: 235 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 624 LREVGLTFHLLKDVPGLISKNIEKSL EAF PLGISDWNSI WIAHPGGPAILDQVE +ATRQVLS+YGNMSSACVLFILDEMRK S +E +TTGEGLDWGVLFGFGPGLTVETVVLHSV Sbjct: 258 LREVGLTFHLLKDVPGLISKNIEKSLIEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLGLKPEKLQATRQVLSDYGNMSSACVLFILDEMRKASSKEGLSTTGEGLDWGVLFGFGPGLTVETVVLHSV 387 The following BLAST results are available for this feature:
BLAST of CF835226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835226 ID=CF835226; Name=CF835226; organism=Citrus sinensis; type=EST; length=626bpback to top |