CF835226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 6.925e-56 Identity = 109/130 (83.85%), Postives = 113/130 (86.92%), Query Frame = -3 Query: 235 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 624 LREVGLTFHLLKDVPGLISKNIEKSL EAF PLGISDWNSI WIAHPGGPAILDQVE +ATRQVLS+YGNMSSACVLFILDEMRK S +E +TTGEGLDWGVLFGFGPGLTVETVVLHSV Sbjct: 258 LREVGLTFHLLKDVPGLISKNIEKSLIEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLSLKPEKLRATRQVLSDYGNMSSACVLFILDEMRKASSKEGLSTTGEGLDWGVLFGFGPGLTVETVVLHSV 387
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.044e-56 Identity = 103/134 (76.87%), Postives = 114/134 (85.07%), Query Frame = -3 Query: 223 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 624 LREVGLTFHLLKDVPGLISKNIE++L +AF PLGI DWNS+ WIAHPGGPAILD VE+ +ATR VLSEYGNMSSACVLFI+DEMRK+S E+ TTGEG+DWGVLFGFGPGLTVETVVLHSVP+ A Sbjct: 261 LREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGGPAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMDWGVLFGFGPGLTVETVVLHSVPVTA 394
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.044e-56 Identity = 105/132 (79.55%), Postives = 115/132 (87.12%), Query Frame = -3 Query: 229 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 624 LREVGLTFHLLKDVPGLISKNIE++L EAF PLGI+D+NSI W+AHPGGPAILDQVE+ +ATR VLSEYGNMSSACVLFILDEMRK+S E+ + TTGEG DWGVLFGFGPGLTVETVVLHSVPI Sbjct: 262 LREVGLTFHLLKDVPGLISKNIERALEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQTTTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.044e-56 Identity = 103/134 (76.87%), Postives = 114/134 (85.07%), Query Frame = -3 Query: 223 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 624 LREVGLTFHLLKDVPGLISKNIE++L +AF PLGI DWNS+ WIAHPGGPAILD VE+ +ATR VLSEYGNMSSACVLFI+DEMRK+S E+ TTGEG+DWGVLFGFGPGLTVETVVLHSVP+ A Sbjct: 259 LREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGGPAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMDWGVLFGFGPGLTVETVVLHSVPVTA 392
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.543e-55 Identity = 106/131 (80.92%), Postives = 113/131 (86.26%), Query Frame = -3 Query: 232 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 624 LREVGLTFHLLKDVPGLISKNIEK+L+ AF+PLGI+DWNSI WIAHPGGPAILDQVE +ATR VLSEYGNMSSACVLFI+DEMRKKS E TTGEGL+WGVLFGFGPGLTVETVVLHSVP Sbjct: 261 LREVGLTFHLLKDVPGLISKNIEKALTTAFSPLGINDWNSIFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFIIDEMRKKSSENGAGTTGEGLEWGVLFGFGPGLTVETVVLHSVP 391
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 2.631e-55 Identity = 107/131 (81.68%), Postives = 112/131 (85.50%), Query Frame = -3 Query: 232 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 624 LREVGLTFHLLKDVPGLISKNI KSL EAF PLGISDWNSI WIAHPGGPAILDQVE+ K+TRQVL +YGNMSSACVLFILDEMRK S ++ TTGEGLDWGVLFGFGPGLTVETVVLHSVP Sbjct: 258 LREVGLTFHLLKDVPGLISKNIRKSLVEAFKPLGISDWNSIFWIAHPGGPAILDQVETELSLKPEKLKSTRQVLRDYGNMSSACVLFILDEMRKASAKDGHRTTGEGLDWGVLFGFGPGLTVETVVLHSVP 388
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 2.631e-55 Identity = 106/130 (81.54%), Postives = 111/130 (85.38%), Query Frame = -3 Query: 235 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 624 LREVG+TFHLLKDVPGLISKNIEKSL EAF PLGISDWNS+ WIAHPGGPAILDQVE ATR VLSEYGNMSSACVLFILDEMR+KS E+ TTGEGLDWGVLFGFGPGLTVETVVLHS+ Sbjct: 258 LREVGVTFHLLKDVPGLISKNIEKSLVEAFQPLGISDWNSLFWIAHPGGPAILDQVEEKLALKPEKLGATRHVLSEYGNMSSACVLFILDEMRRKSAEKGLKTTGEGLDWGVLFGFGPGLTVETVVLHSL 387
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS1_CITSI (Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.437e-55 Identity = 106/130 (81.54%), Postives = 111/130 (85.38%), Query Frame = -3 Query: 235 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 624 LRE GLTFHLLKDVPGLISKNI+KSL+EAF PLGISDWNSI WIAHPGGPAILDQVE +ATR VLSEYGNMSSACVLFILDEMRKKS E+ T GEGL+WGVLFGFGPGLTVETVVLHSV Sbjct: 257 LREAGLTFHLLKDVPGLISKNIQKSLTEAFKPLGISDWNSIFWIAHPGGPAILDQVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSV 386
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS1_HORVU (Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.488e-55 Identity = 104/134 (77.61%), Postives = 113/134 (84.33%), Query Frame = -3 Query: 223 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 624 LREVGLTFHLLKDVPGLISKNIE++L EAF PLGI WNS+ WIAH GGPAILD VE+ +ATR VLSEYGNMSSACVLFI+DEMRK+S E+ ATTGEG+DWGVLFGFGPGLTVETVVLHSVPI A Sbjct: 261 LREVGLTFHLLKDVPGLISKNIERALEEAFKPLGIDHWNSVFWIAHQGGPAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHATTGEGMDWGVLFGFGPGLTVETVVLHSVPISA 394
BLAST of CF835226 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.488e-55 Identity = 106/130 (81.54%), Postives = 112/130 (86.15%), Query Frame = -3 Query: 235 LREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSILWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 624 LREVGLTFHLLKDVPGLISKNIEKSL+EAF PLGISDWNS+ WIAHPGGPAILDQVE +ATR VLSEYGNMSSACVLFILDEMRKKS + TTGEGL+WGVLFGFGPGLTVETVVLHS+ Sbjct: 258 LREVGLTFHLLKDVPGLISKNIEKSLAEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAADGLKTTGEGLEWGVLFGFGPGLTVETVVLHSL 387 The following BLAST results are available for this feature:
BLAST of CF835226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835226 ID=CF835226; Name=CF835226; organism=Citrus sinensis; type=EST; length=626bpback to top |