CF835227

Overview
NameCF835227
Unique NameCF835227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2)

HSP 1 Score: 285.034 bits (728), Expect = 2.277e-76
Identity = 143/219 (65.30%), Postives = 161/219 (73.52%), Query Frame = 2
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHL+FCTT+GVDM GADYQLTKL+GL PSVKR MMYQ GC+ GGTVLRLAKDLAENNKGAR LVVCSEITA+TF  P+DT LD LVGQALF            P+  VE+PL++LVS +QT++PD    I G   +VGLTFHL KDVP L+S+NIEKSL E F PLGI DWNSIFW+ H GG  ILDQVE            TR V+SE
Sbjct:  115 KEWGQPKSKITHLVFCTTTGVDMHGADYQLTKLLGLSPSVKRLMMYQLGCYGGGTVLRLAKDLAENNKGARALVVCSEITAITFHAPSDTDLDVLVGQALFGDGAASVIIGSDPNLEVEKPLFELVSAAQTLVPDCGHKIYGKTSDVGLTFHLHKDVPRLVSQNIEKSLVEVFQPLGIFDWNSIFWVGHAGGREILDQVELKLGLKPEKLNVTRHVMSE 333          
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: THS3_ARAHY (Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.130e-75
Identity = 144/218 (66.06%), Postives = 165/218 (75.69%), Query Frame = 2
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLS 655
            KEW  P SKITHLIFCTTSGV +PG DY+L  L+GL P VKR+MMY QGCFAGGTVLRLAKDLAENNK ARVL+VCSE TAVTFRGP++T +DSLVGQALF            P   VE+P+++LVST Q ++P S GAI G LREVGLTF+L K VP +IS+NI  +L++AF PLGISD+NSIFWIAHPGG AILDQVE           ATR VLS
Sbjct:  115 KEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPCVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTAVTFRGPSETDMDSLVGQALFADGAAAIIIGSDPVPEVEKPIFELVSTDQKLVPGSHGAIGGLLREVGLTFYLNKSVPDIISQNINDALNKAFDPLGISDYNSIFWIAHPGGRAILDQVEQKVNLKPEKMKATRDVLS 332          
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: THS1_ARAHY (Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 9.565e-75
Identity = 144/218 (66.06%), Postives = 164/218 (75.23%), Query Frame = 2
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLS 655
            KEW  P SKITHLIFCTTSGV +PG DY+L  L+GL PSVKR+MMY QGCFAGGTVLRLAKDLAENNK ARVL+VCSE TAVTFRGP +T +DSLVGQALF            P   VE P++++VST Q ++P+S GAI G LREVGLTF+L K VP +IS+NI  +LS+AF PLGISD+NSIFWIAH GG AILDQVE           ATR VLS
Sbjct:  115 KEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTAVTFRGPNETDMDSLVGQALFADGAAAIIIGSDPVPEVENPIFEIVSTDQQLVPNSHGAIGGLLREVGLTFYLNKSVPDIISQNINGALSKAFDPLGISDYNSIFWIAHLGGRAILDQVEQKVNLKPEKMKATRDVLS 332          
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: DPS2_PINST (Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.635e-74
Identity = 139/219 (63.47%), Postives = 164/219 (74.89%), Query Frame = 2
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            +EW  PKS+ITHLIFCTT+  D+PGAD+++ KL+GL PSVKR  ++Q GCFAGGTVLRLAKDLAENN+GARVLVVCSE TAVTFRGP++THLD LVG ALF            P   VE+P +++V T+QT++P+SDGAI G LREVGLTF L   VP LIS NIEK L EAF+   ISDWN +FWIAHPGG AILDQVE+          ATR V+SE
Sbjct:  121 EEWGQPKSRITHLIFCTTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRLAKDLAENNRGARVLVVCSENTAVTFRGPSETHLDGLVGLALFGDGAAALIVGADPIPQVEKPCFEIVWTAQTVVPNSDGAISGKLREVGLTFQLKGAVPDLISTNIEKCLVEAFSQFNISDWNQLFWIAHPGGRAILDQVEASLNLDPTKLRATRHVMSE 339          
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: DPS1_PINST (Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.635e-74
Identity = 139/219 (63.47%), Postives = 164/219 (74.89%), Query Frame = 2
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            +EW  PKS+ITHLIFCTT+  D+PGAD+++ KL+GL PSVKR  ++Q GCFAGGTVLRLAKDLAENN+GARVLVVCSE TAVTFRGP++THLD LVG ALF            P   VE+P +++V T+QT++P+SDGAI G LREVGLTF L   VP LIS NIEK L EAF+   ISDWN +FWIAHPGG AILDQVE+          ATR V+SE
Sbjct:  121 EEWGQPKSRITHLIFCTTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRLAKDLAENNRGARVLVVCSENTAVTFRGPSETHLDGLVGLALFGDGASALIVGADPIPQVEKPCFEIVWTAQTVVPNSDGAISGKLREVGLTFQLKGAVPDLISTNIEKCLVEAFSQFNISDWNQLFWIAHPGGHAILDQVEASLNLDPTKLRATRHVMSE 339          
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.356e-73
Identity = 137/176 (77.84%), Postives = 148/176 (84.09%), Query Frame = 2
Query:  131 MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   VE+PL++LVS +QT+LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL+EA  P+GISDWNS+FWIAHPGGPAILDQVE+          ATRQVLS+
Sbjct:    1 MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPVPEVEKPLFELVSAAQTVLPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLNEALKPIGISDWNSLFWIAHPGGPAILDQVEAKLALKPEKLEATRQVLSD 176          
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHSB_PETHY (Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.077e-73
Identity = 133/218 (61.01%), Postives = 162/218 (74.31%), Query Frame = 2
Query:    5 EWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            EW  PKS ITHL+FCT SGVDMPGAD QL KL+GL PSV+R MMYQQGCFAGGT+LRLAKDLAENNKGARVLVVC+E +A+ FRGP++ ++D+L+ QALF            P   +ERP++++ S +QT +P+ D  +  HLRE+GLTFH  KDVP  I+KN+E  L +AF PLGISDWNS+FWI HPGG AI+DQVES          ATR +LSE
Sbjct:  119 EWGQPKSTITHLVFCTRSGVDMPGADCQLVKLLGLSPSVQRLMMYQQGCFAGGTMLRLAKDLAENNKGARVLVVCAESSAIGFRGPSEANVDNLIAQALFGDGAAALIIGSDPKPGLERPVFEIFSAAQTFVPNGDCHLALHLREMGLTFHCTKDVPPTIAKNVESCLIKAFEPLGISDWNSLFWILHPGGNAIVDQVESTLGLGPEKLRATRNILSE 336          
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHSG_PETHY (Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=2 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 1.429e-70
Identity = 136/222 (61.26%), Postives = 162/222 (72.97%), Query Frame = 2
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPA--DT-HLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            +EW   KSKITHL+FCTT+ V++PGADYQLTKL+GL PSVKR MMYQQGC+ GGT LRLAKDLAENNKGARVLVVC EIT ++F+ P+  DT  LD LVGQALF            P  ++E+PL++LV  +QT++PDS   I  +L E GL  HLLKD P +IS+NIE+ L E F PLGISDWNSIFW+AHPGGPAIL+Q+E           A R VLSE
Sbjct:  115 EEWSQSKSKITHLVFCTTTSVELPGADYQLTKLLGLSPSVKRSMMYQQGCYGGGTALRLAKDLAENNKGARVLVVCVEITVMSFQAPSRNDTDELDVLVGQALFADGASAVIIGSDPILAIEKPLFELVFATQTLIPDSGHVICANLTEAGLIPHLLKDAPIVISQNIERRLVEVFKPLGISDWNSIFWVAHPGGPAILNQIELKLGLKPEKLRAARHVLSE 336          
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPL (Chalcone synthase A (Fragment) OS=Ipomoea platensis GN=CHSA PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 7.094e-70
Identity = 133/219 (60.73%), Postives = 157/219 (71.69%), Query Frame = 2
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAENNKGARVLVVCSE+T   FRGP+    D+L+ Q LF            P   +E PL++LVS++QTI+PD+D  +  HL E+GLTFH  K VP LI++N+E  L +AF P GISDWNSIFWI HPGG AILD+VE           A+R VLSE
Sbjct:  119 KEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNISVKRLMMYQQGCNAGAAMLRLAKDLAENNKGARVLVVCSEVTLSVFRGPSLQQEDNLLAQCLFGDGSAAVIVGTDPRPGLETPLFELVSSAQTIIPDTDSHLKLHLLEMGLTFHCSKAVPSLITQNVEDCLVKAFEPFGISDWNSIFWILHPGGNAILDRVEERLGLGPEKLRASRDVLSE 337          
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: DPSS_PINSY (Dihydropinosylvin synthase OS=Pinus sylvestris PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.005e-69
Identity = 128/219 (58.45%), Postives = 160/219 (73.06%), Query Frame = 2
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            +EW   KS ITHLIFC+T+  D+PGAD+++ KL+GL PSVKR  ++Q GCFAGGTVLR+AKDLAENN+GARVLV+CSE TAVTFRGP++THLDSLVGQALF            P   VE+  +++V T+QT++P+S+GAI G +REVGLTF L   VP LIS NIE  + EAF+   ISDWN +FW+ HPGG AILD+VE+           TR V+SE
Sbjct:  118 QEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSE 336          
The following BLAST results are available for this feature:
BLAST of CF835227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CHSF_PETHY2.277e-7665.30Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=... [more]
THS3_ARAHY1.130e-7566.06Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1[more]
THS1_ARAHY9.565e-7566.06Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1[more]
DPS2_PINST3.635e-7463.47Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=... [more]
DPS1_PINST3.635e-7463.47Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=... [more]
CHSY_MALDO2.356e-7377.84Chalcone synthase (Fragment) OS=Malus domestica GN... [more]
CHSB_PETHY3.077e-7361.01Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=... [more]
CHSG_PETHY1.429e-7061.26Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=... [more]
CHSA_IPOPL7.094e-7060.73Chalcone synthase A (Fragment) OS=Ipomoea platensi... [more]
DPSS_PINSY6.005e-6958.45Dihydropinosylvin synthase OS=Pinus sylvestris PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835227 ID=CF835227; Name=CF835227; organism=Citrus sinensis; type=EST; length=659bp
CAAAGAATGGCGCCTGCCCAAGTCTAAGATCACCCACCTCATCTTCTGCA
CCACCTCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAAACTG
ATCGGCCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATG
TTTCGCCGGCGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACA
ACAAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCAGTCACT
TTCCGCGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAGGCTTT
GTTCGGTGATGGTGCTGCTGCTGTGATCGTGGGTGCCGATCCTGACACGT
CGGTCGAGCGTCCGTTGTATCAGCTCGTGTCGACTTCGCAGACGATCCTC
CCTGACTCTGACGGTGCAATTGACGGACACTTGCGCGAAGTCGGTCTCAC
TTTCCATTTGCTTAAAGACGTCCCCGGCTTGATCTCAAAGAATATAGAGA
AAAGCCTGTCTGAAGCGTTCGCCCCGCTTGGCATCAGCGACTGGAACTCG
ATATTCTGGATCGCTCACCCCGGTGGGCCCGCAATTCTGGACCAAGTGGA
GTCTAAACTGGGCCTCAAAGGGGAGAAGCTGAAGGCCACACGTCAAGTGT
TGAGTGAGT
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