CF835227

Overview
NameCF835227
Unique NameCF835227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9291 contig Csv1_Contig9291:395..1053. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHSA_PEA (Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE=3 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.677e-93
Identity = 171/219 (78.08%), Postives = 184/219 (84.02%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   VE+PL++LV T+QTI+PDS+GAIDGHLRE GLTFHLLKDVP L+SKNIEK+L EAF PL ISD+NSIFWIAHPGGPAILDQVE+          ATR VLSE
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPLPDVEKPLFELVWTAQTIVPDSEGAIDGHLREAGLTFHLLKDVPSLVSKNIEKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEAKLGLKQRKMQATRHVLSE 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.677e-93
Identity = 171/219 (78.08%), Postives = 183/219 (83.56%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTK +GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   VE+PLY+LV T+QTI PDS+GAIDGHLREVGLTFHLLKDVPG++SKNI+K+L EAF PL ISD+NSIFWIAHPGGPAILDQVE           ATR VLSE
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQVEKPLYELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIDKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSE 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.677e-93
Identity = 173/219 (79.00%), Postives = 185/219 (84.47%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRPSVKR+MMYQQGCFAGGTVLRLAKDLAENN GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P    E+PL++LV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNI+K+L EAF PLGI D+NSIFWIAHPGGPAILDQVE+          ATR VLSE
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNTGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDP-LPAEKPLFELVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIQKALVEAFQPLGIDDYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSE 332
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 3.496e-93
Identity = 166/219 (75.80%), Postives = 185/219 (84.47%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKS+ITHLIFCTTSG+DMPGADYQLT+L+GLRPSV RFM+YQQGCFAGGTVLRLAKDLAENN GARVLVVCSEITAVTFRGP+++HLDSLVGQALF            PD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF PLG+ DWNSIFWIAHPGGPAILDQVE           A+R VL+E
Sbjct:  116 KEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRNVLAE 334
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 3.496e-93
Identity = 166/219 (75.80%), Postives = 185/219 (84.47%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKS+ITHLIFCTTSG+DMPGADYQLT+L+GLRPSV RFM+YQQGCFAGGTVLRLAKDLAENN GARVLVVCSEITAVTFRGP+++HLDSLVGQALF            PD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF PLG+ DWNSIFWIAHPGGPAILDQVE           A+R VL+E
Sbjct:  116 KEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRSVLAE 334
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 3.496e-93
Identity = 166/219 (75.80%), Postives = 185/219 (84.47%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKS+ITHLIFCTTSG+DMPGADYQLT+L+GLRPSV RFM+YQQGCFAGGTVLRLAKDLAENN GARVLVVCSEITAVTFRGP+++HLDSLVGQALF            PD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF PLG+ DWNSIFWIAHPGGPAILDQVE           A+R VL+E
Sbjct:  116 KEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRNVLAE 334
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 3.496e-93
Identity = 167/219 (76.26%), Postives = 185/219 (84.47%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF PLGISD+NSIFWIAHPGGPAILDQVE           ATR+VLSE
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREQGLTFHLLKDVPGIVSKNIDKALVEAFKPLGISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMRATREVLSE 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 4.566e-93
Identity = 170/219 (77.63%), Postives = 183/219 (83.56%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   +E+PL++LV T+QTI PDSDGAIDGHLREVGLTFHLLKDVPG++SKNI K+L EAF PL ISD+NSIFWIAHPGGPAILDQVE           ATR VLS+
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSD 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 5.964e-93
Identity = 170/219 (77.63%), Postives = 183/219 (83.56%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTK +GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   VE+PLY+LV T+QTI PDS+GAIDGHLREVGLTFHLLKDVPG++SKNI+K+L EAF PL ISD+NSIFWIAHPGGPAILDQVE           ATR VLS+
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQVEKPLYELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIDKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSD 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS3_TRISU (Chalcone synthase 3 OS=Trifolium subterraneum GN=CHS3 PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 5.964e-93
Identity = 167/219 (76.26%), Postives = 184/219 (84.02%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++ +V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF PLGISD+NSIFWIAHPGGPAILDQVE           ATR+VLSE
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFVMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSE 333
The following BLAST results are available for this feature:
BLAST of CF835227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CHSA_PEA2.677e-9378.08Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE... [more]
CHS7_SOYBN2.677e-9378.08Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV... [more]
CHS6_SOYBN2.677e-9379.00Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHS8_BROFI3.496e-9375.80Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_BROFI3.496e-9375.80Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]
CHS3_BROFI3.496e-9375.80Chalcone synthase 3 OS=Bromheadia finlaysoniana GN... [more]
CHS1_PEA3.496e-9376.26Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ... [more]
CHSY_PHAVU4.566e-9377.63Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHSY_PUELO5.964e-9377.63Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHS3_TRISU5.964e-9376.26Chalcone synthase 3 OS=Trifolium subterraneum GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835227 ID=CF835227; Name=CF835227; organism=Citrus sinensis; type=EST; length=659bp
CAAAGAATGGCGCCTGCCCAAGTCTAAGATCACCCACCTCATCTTCTGCA
CCACCTCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAAACTG
ATCGGCCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATG
TTTCGCCGGCGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACA
ACAAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCAGTCACT
TTCCGCGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAGGCTTT
GTTCGGTGATGGTGCTGCTGCTGTGATCGTGGGTGCCGATCCTGACACGT
CGGTCGAGCGTCCGTTGTATCAGCTCGTGTCGACTTCGCAGACGATCCTC
CCTGACTCTGACGGTGCAATTGACGGACACTTGCGCGAAGTCGGTCTCAC
TTTCCATTTGCTTAAAGACGTCCCCGGCTTGATCTCAAAGAATATAGAGA
AAAGCCTGTCTGAAGCGTTCGCCCCGCTTGGCATCAGCGACTGGAACTCG
ATATTCTGGATCGCTCACCCCGGTGGGCCCGCAATTCTGGACCAAGTGGA
GTCTAAACTGGGCCTCAAAGGGGAGAAGCTGAAGGCCACACGTCAAGTGT
TGAGTGAGT
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