CF835227

Overview
NameCF835227
Unique NameCF835227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9291 contig Csv1_Contig9291:395..1053. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 5.964e-93
Identity = 170/219 (77.63%), Postives = 183/219 (83.56%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  P+SKITHL+FCTTSGVDMPGADYQLTK++GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP +   DSLVGQALF            PD SVERPL+QLVS SQTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE++L +AF PLGI DWNS+FWIAHPGGPAILD VE+          ATR VLSE
Sbjct:  118 KEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPHE--FDSLVGQALFGDGAAAVIVGADPDESVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGGPAILDMVEAKVNLNKERMRATRHVLSE 334
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.017e-92
Identity = 166/219 (75.80%), Postives = 184/219 (84.02%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF PL ISD+NSIFWIAHPGGPAILDQVE           ATR+VLSE
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATREVLSE 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.017e-92
Identity = 166/219 (75.80%), Postives = 184/219 (84.02%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF PL ISD+NSIFWIAHPGGPAILDQVE           ATR+VLSE
Sbjct:   11 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATREVLSE 229
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS5_PEA (Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.017e-92
Identity = 166/219 (75.80%), Postives = 184/219 (84.02%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVP ++SKNI+K+L EAF PLGISD+NSIFWIAHPGGPAILDQVE           ATR+VLSE
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPAIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSE 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS2_TRISU (Chalcone synthase 2 OS=Trifolium subterraneum GN=CHS2 PE=3 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.017e-92
Identity = 166/219 (75.80%), Postives = 184/219 (84.02%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF PL ISD+NSIFWIAHPGGPAILDQVE           ATR+VLSE
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSE 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS1_CICAR (Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.017e-92
Identity = 166/219 (75.80%), Postives = 184/219 (84.02%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF PL ISD+NSIFWIAHPGGPAILDQVE           ATR+VLSE
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALIEAFQPLNISDYNSIFWIAHPGGPAILDQVEEKLALKPEKMRATREVLSE 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.329e-92
Identity = 169/219 (77.17%), Postives = 183/219 (83.56%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   +E+PL++LV T+QTI PDS+GAIDGHLREVGLTFHLLKDVPG++SKNI K+LSEAF PL ISD+NSIFWIAHPGGPAILDQV            ATR VLS+
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALSEAFDPLNISDYNSIFWIAHPGGPAILDQVAQKLGLKPEKMKATRDVLSD 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS4_PEA (Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.329e-92
Identity = 166/219 (75.80%), Postives = 184/219 (84.02%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVP ++SKNI+K+L EAF PLGISD+NSIFWIAHPGGPAILDQVE           ATR+VLSE
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPLPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPAIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSE 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2)

HSP 1 Score: 338.961 bits (868), Expect = 1.329e-92
Identity = 166/219 (75.80%), Postives = 184/219 (84.02%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF PLGISD+NSIFWIAHPGGPAILDQVE           ATR+VLSE
Sbjct:  115 KEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMRATREVLSE 333
[Close]
BLAST of CF835227 vs. ExPASy Swiss-Prot
Match: CHS6_TRISU (Chalcone synthase 6 OS=Trifolium subterraneum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 1.735e-92
Identity = 166/219 (75.80%), Postives = 183/219 (83.56%), Query Frame = 2 
Query:    2 KEWRLPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXXATRQVLSE 658
            KEW  PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF PL ISD+NSIFWIAHPGGPAILDQVE           ATR VLSE
Sbjct:  115 KEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATRDVLSE 333
The following BLAST results are available for this feature:
BLAST of CF835227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CHS1_SECCE5.964e-9377.63Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHS9_MEDSA1.017e-9275.80Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=... [more]
CHS6_MEDSA1.017e-9275.80Chalcone synthase 6-4 (Fragment) OS=Medicago sativ... [more]
CHS5_PEA1.017e-9275.80Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 ... [more]
CHS2_TRISU1.017e-9275.80Chalcone synthase 2 OS=Trifolium subterraneum GN=C... [more]
CHS1_CICAR1.017e-9275.80Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=... [more]
CHSY_VIGUN1.329e-9277.17Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHS4_PEA1.329e-9275.80Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 ... [more]
CHS4_MEDSA1.329e-9275.80Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=... [more]
CHS6_TRISU1.735e-9275.80Chalcone synthase 6 OS=Trifolium subterraneum GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835227 ID=CF835227; Name=CF835227; organism=Citrus sinensis; type=EST; length=659bp
CAAAGAATGGCGCCTGCCCAAGTCTAAGATCACCCACCTCATCTTCTGCA
CCACCTCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAAACTG
ATCGGCCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATG
TTTCGCCGGCGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACA
ACAAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCAGTCACT
TTCCGCGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAGGCTTT
GTTCGGTGATGGTGCTGCTGCTGTGATCGTGGGTGCCGATCCTGACACGT
CGGTCGAGCGTCCGTTGTATCAGCTCGTGTCGACTTCGCAGACGATCCTC
CCTGACTCTGACGGTGCAATTGACGGACACTTGCGCGAAGTCGGTCTCAC
TTTCCATTTGCTTAAAGACGTCCCCGGCTTGATCTCAAAGAATATAGAGA
AAAGCCTGTCTGAAGCGTTCGCCCCGCTTGGCATCAGCGACTGGAACTCG
ATATTCTGGATCGCTCACCCCGGTGGGCCCGCAATTCTGGACCAAGTGGA
GTCTAAACTGGGCCTCAAAGGGGAGAAGCTGAAGGCCACACGTCAAGTGT
TGAGTGAGT
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