CF835245

Overview
NameCF835245
Unique NameCF835245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig762 contig Csv1_Contig762:67..791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_MOUSE (Calmodulin OS=Mus musculus GN=Calm1 PE=1 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.395e-72
Identity = 133/149 (89.26%), Postives = 144/149 (96.64%), Query Frame = 2 
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_HUMAN (Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.395e-72
Identity = 133/149 (89.26%), Postives = 144/149 (96.64%), Query Frame = 2 
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_GECJA (Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV=3)

HSP 1 Score: 272.707 bits (696), Expect = 1.395e-72
Identity = 133/149 (89.26%), Postives = 144/149 (96.64%), Query Frame = 2 
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_DANRE (Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3)

HSP 1 Score: 272.707 bits (696), Expect = 1.395e-72
Identity = 133/149 (89.26%), Postives = 144/149 (96.64%), Query Frame = 2 
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_CTEID (Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2 SV=3)

HSP 1 Score: 272.707 bits (696), Expect = 1.395e-72
Identity = 133/149 (89.26%), Postives = 144/149 (96.64%), Query Frame = 2 
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_CHICK (Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.395e-72
Identity = 133/149 (89.26%), Postives = 144/149 (96.64%), Query Frame = 2 
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_BOVIN (Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.395e-72
Identity = 133/149 (89.26%), Postives = 144/149 (96.64%), Query Frame = 2 
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_ANAPL (Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.395e-72
Identity = 133/149 (89.26%), Postives = 144/149 (96.64%), Query Frame = 2 
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM2_BRALA (Calmodulin-2 OS=Branchiostoma lanceolatum GN=CAM2 PE=2 SV=3)

HSP 1 Score: 272.322 bits (695), Expect = 1.822e-72
Identity = 132/149 (88.59%), Postives = 144/149 (96.64%), Query Frame = 2 
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEM+READ+DGDGQ+NYEEFV++M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMVREADIDGDGQVNYEEFVEMMTSK 149
[Close]
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_LOCMI (Calmodulin OS=Locusta migratoria PE=1 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 2.380e-72
Identity = 133/149 (89.26%), Postives = 143/149 (95.97%), Query Frame = 2 
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
The following BLAST results are available for this feature:
BLAST of CF835245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
CALM_MOUSE1.395e-7289.26Calmodulin OS=Mus musculus GN=Calm1 PE=1 SV=2[more]
CALM_HUMAN1.395e-7289.26Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2[more]
CALM_GECJA1.395e-7289.26Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV... [more]
CALM_DANRE1.395e-7289.26Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3[more]
CALM_CTEID1.395e-7289.26Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2... [more]
CALM_CHICK1.395e-7289.26Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2[more]
CALM_BOVIN1.395e-7289.26Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2[more]
CALM_ANAPL1.395e-7289.26Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2[more]
CALM2_BRALA1.822e-7288.59Calmodulin-2 OS=Branchiostoma lanceolatum GN=CAM2 ... [more]
CALM_LOCMI2.380e-7289.26Calmodulin OS=Locusta migratoria PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835245 ID=CF835245; Name=CF835245; organism=Citrus sinensis; type=EST; length=725bp
GAAAATGGCGGATCTGCTCACCGACGATCAGATCTCCGAGTTCAAAGAAG
CCTTCAGCTTGTTCGACAAGGACGGCGACGGTTGCATTACCACCAAGGAG
CTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCT
CCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATT
TTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCT
GAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGG
TTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGGGAGA
AGCTTACTGATGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGAT
GGTGATGGCCAGATAAATTACGAGGAATTTGTCAAGGTTATGATGGCTAA
GTAAGTGACTCCACCCAACCAAAACTTCCTGGGAAAAGAAGAAATTGGTT
GATTAATATAATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGA
TAACTCTGAGGTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTG
TCTTGTGACTGGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCC
GCTCTTCTGTGAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCC
CTATTTCTTAAAAAAAAAAAAAAAA
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