CF835245

Overview
NameCF835245
Unique NameCF835245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig762 contig Csv1_Contig762:67..791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_CAEEL (Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3)

HSP 1 Score: 271.552 bits (693), Expect = 3.108e-72
Identity = 133/149 (89.26%), Postives = 142/149 (95.30%), Query Frame = 2
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149          
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_TRYBG (Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 4.059e-72
Identity = 134/149 (89.93%), Postives = 144/149 (96.64%), Query Frame = 2
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD L+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LMARKM+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_TRYBB (Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 4.059e-72
Identity = 134/149 (89.93%), Postives = 144/149 (96.64%), Query Frame = 2
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD L+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LMARKM+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 4.059e-72
Identity = 132/149 (88.59%), Postives = 144/149 (96.64%), Query Frame = 2
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD L+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREAD+DGDGQINYEEFVK+M++K
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADIDGDGQINYEEFVKMMLSK 149          
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_STIJA (Calmodulin OS=Stichopus japonicus PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 5.301e-72
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = 2
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149          
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_MYXGL (Calmodulin OS=Myxine glutinosa PE=2 SV=3)

HSP 1 Score: 270.781 bits (691), Expect = 5.301e-72
Identity = 132/149 (88.59%), Postives = 144/149 (96.64%), Query Frame = 2
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEV+ADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVNADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149          
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 6.924e-72
Identity = 132/149 (88.59%), Postives = 144/149 (96.64%), Query Frame = 2
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_STRIE (Calmodulin OS=Strongylocentrotus intermedius PE=2 SV=3)

HSP 1 Score: 270.011 bits (689), Expect = 9.042e-72
Identity = 132/148 (89.19%), Postives = 142/148 (95.95%), Query Frame = 2
Query:    8 ADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            AD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    9 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 156          
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 9.042e-72
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = 2
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149          
BLAST of CF835245 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 270.011 bits (689), Expect = 9.042e-72
Identity = 132/149 (88.59%), Postives = 142/149 (95.30%), Query Frame = 2
Query:    5 MADLLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 451
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTCK 149          
The following BLAST results are available for this feature:
BLAST of CF835245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
CALM_CAEEL3.108e-7289.26Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1... [more]
CALM_TRYBG4.059e-7289.93Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV... [more]
CALM_TRYBB4.059e-7289.93Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2[more]
CALM_PLECO4.059e-7288.59Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S... [more]
CALM_STIJA5.301e-7288.59Calmodulin OS=Stichopus japonicus PE=1 SV=2[more]
CALM_MYXGL5.301e-7288.59Calmodulin OS=Myxine glutinosa PE=2 SV=3[more]
CALM_RENRE6.924e-7288.59Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_STRIE9.042e-7289.19Calmodulin OS=Strongylocentrotus intermedius PE=2 ... [more]
CALM_PYUSP9.042e-7288.59Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]
CALMB_HALRO9.042e-7288.59Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835245 ID=CF835245; Name=CF835245; organism=Citrus sinensis; type=EST; length=725bp
GAAAATGGCGGATCTGCTCACCGACGATCAGATCTCCGAGTTCAAAGAAG
CCTTCAGCTTGTTCGACAAGGACGGCGACGGTTGCATTACCACCAAGGAG
CTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCT
CCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATT
TTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCT
GAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGG
TTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGGGAGA
AGCTTACTGATGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGAT
GGTGATGGCCAGATAAATTACGAGGAATTTGTCAAGGTTATGATGGCTAA
GTAAGTGACTCCACCCAACCAAAACTTCCTGGGAAAAGAAGAAATTGGTT
GATTAATATAATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGA
TAACTCTGAGGTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTG
TCTTGTGACTGGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCC
GCTCTTCTGTGAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCC
CTATTTCTTAAAAAAAAAAAAAAAA
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