CF835252

Overview
NameCF835252
Unique NameCF835252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.326e-35
Identity = 85/156 (54.49%), Postives = 98/156 (62.82%), Query Frame = -3
Query:  258 VMELFADVTPRTAENFRALCTGEKGIGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 710
            V EL+ DV P+TAENF  LC G+ G+ KS    PL YKGS FHRVI  FM Q           GESIYG KF DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKHVVFG+V+EG  +V+ IEK  +  G T+KP   V +  CG L
Sbjct:   21 VFELYKDVVPKTAENFLKLCEGKSGMAKSKPDVPLSYKGSIFHRVIKDFMIQFGDFTNFDGTGGESIYGEKFEDENFEIKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIEGKRLVRLIEKQQTEDG-TDKPMHDVKVEGCGLL 175          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.732e-35
Identity = 82/152 (53.95%), Postives = 98/152 (64.47%), Query Frame = -3
Query:  258 VMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVV-IADCGQL 710
            V+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q           G+SIYG KF DENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG +VV+AIE V    G   + VV I   G+L
Sbjct:   37 VLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVVKIVKSGEL 181          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.263e-35
Identity = 77/152 (50.66%), Postives = 100/152 (65.79%), Query Frame = -3
Query:  258 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGS-KFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSS-SGRTNKPVVIADCGQL 707
            MELF+D+ PRTAENFR LCTGE    ++G P  YK   FHRVI  FM Q              IYG  +FADENF++KHTG G+LSMAN+GP +NG QFF+     ++LDGKHVVFG++V+G+  ++ IE V +  + R   PV I +CGQ+
Sbjct:   29 MELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATGPNNRPKLPVKITECGQM 178          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.263e-35
Identity = 79/152 (51.97%), Postives = 96/152 (63.16%), Query Frame = -3
Query:  258 VMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE-KVGSSSGRTNKPVVIADCGQL 710
            ++ LF    P+T ENF+ L  G +   K G+   YKGS+FHRVI  FM Q           G SIYG +F DENF  +H G G LSMANAGP TNGSQFF+ T KT WLDGKHVVFG+VVEGM++V+ IE +   S  R  K + IA CG +
Sbjct:   49 IIGLFGKTVPKTVENFKQLSIGTQL--KDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKIASCGHI 198          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.955e-35
Identity = 81/154 (52.60%), Postives = 98/154 (63.64%), Query Frame = -3
Query:  258 VMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 710
            VM L+    P T ENFRAL TGEKG G       Y+GS+FHRVI  FM Q           G+SIYG +F DENF  KHT  G+LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG ++++ IE   S +G  ++P   V IA  G+L
Sbjct:   52 VMGLYGKTVPETTENFRALATGEKGFG-------YEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGYEIIEKIE--NSKTGAADRPVEAVKIAKSGEL 196          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.859e-35
Identity = 78/147 (53.06%), Postives = 94/147 (63.95%), Query Frame = -3
Query:  264 ELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCG 704
            ELF +V P+T +NF +LC G +   K G+ L YKGS FHRVI  FM Q           GESIYG KF DENF  KH  P +LSMANAGP TNGSQFF+ T  T  LDGKHVVFG+V++G   V+ IE + + +     PVVI +CG
Sbjct:   22 ELFDNVVPKTVKNFASLCNGFE---KDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.598e-35
Identity = 76/153 (49.67%), Postives = 101/153 (66.01%), Query Frame = -3
Query:  258 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSK-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEK--VGSSSGRTNKPVVIADCGQL 707
            + LF+ + P+TAENFR  CTGE  +G + KP+ YK S+FHR+I GFM Q             +I+ S+ F DENF  KH  PG+LSMANAG  +NG QFF+ T   ++LDGKHVVFG+V+EG D+VK IE   VG++S R    V I +CG++
Sbjct:   23 IRLFSSIVPKTAENFRQFCTGET-LGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANS-RPKSNVAIVECGEM 173          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.123e-34
Identity = 82/156 (52.56%), Postives = 94/156 (60.26%), Query Frame = -3
Query:  258 VMELFADVTPRTAENFRALCTGEKGIGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 710
            V EL+ D+ P+TAENF  LC G  G+ K+    PL YKGS FHRVI  FMCQ           GESIY  KF DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKHVVFG+V++G  +V+ IE         NKP   V I DCG L
Sbjct:   21 VFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIEN-QQCDQENNKPLRDVKIDDCGVL 175          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.915e-34
Identity = 79/152 (51.97%), Postives = 95/152 (62.50%), Query Frame = -3
Query:  258 VMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS-GRTNKPVVIADCGQL 710
            ++ LF    P+T ENF+ L  G     K G+   YKGS+FHRVI  FM Q           G SIYG +F DENF  KH G G LSMANAGP TNG+QFF+ T +  WLDGKHVVFG+VVEGM VV+ IE + + S  R  K V IA+CG +
Sbjct:   49 IIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKIANCGHI 198          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34
Identity = 76/152 (50.00%), Postives = 95/152 (62.50%), Query Frame = -3
Query:  258 ELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 704
            ELF+D+ PRT+ENFR LCTGE     +  P  YK S FHR+I  FMCQ             SIYG KF DENF  KH   G+LSMAN+GPGTNG QFF+      +LDGKHVVFG+VV+G+  ++ +E V   +G  N+P   V I  CG++
Sbjct:    9 ELFSDIVPRTSENFRQLCTGE--FRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENV--PTGANNRPKMAVRITQCGEM 156          
The following BLAST results are available for this feature:
BLAST of CF835252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
PPID_CANGA1.326e-3554.49Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
PPIB_ASPOR1.732e-3553.95Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIH_RHIOR2.263e-3550.66Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPIB_SCHMA2.263e-3551.97Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_GIBZE2.955e-3552.60Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPID_SCHPO3.859e-3553.0640 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
PPIH_SCHPO8.598e-3549.67Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
PPID_YEAST1.123e-3452.56Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
PPIB_SCHJA1.915e-3451.97Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIH_USTMA5.573e-3450.00Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835252 ID=CF835252; Name=CF835252; organism=Citrus sinensis; type=EST; length=712bp
TTTTTTTTTTTTTTTTTATAACAGACAAGCCCTATCTTATTTAAAAAGGC
TTCTCATAGAAAGACATAAAAAACAGTTCATCAGGAACCACCACCGGAGA
CCCGATCCAACCCGAACAAGTAACATAGCAGGAAAATTAGATAAAGATTA
AAAGTCCTACAGACACGGCCACATAATAATAGATAACATAATCACCATCA
CGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTATCATGATCAAA
TCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCTTGTTGGTCCTT
CCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACGTCCATTCCTTC
GACGACTTGACCGAACACAACGTGCTTCCCATCGAGCCACTCGGTCTTGG
CCGTACAGACGAAGAACTGAGATCCGTTGGTTCCGGGTCCGGCATTCGCC
ATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAGTTCTCATCGGC
GAATTTTGAGCCGTAGATTGATTCGCCTCCGGTTCCGTTTCCGGCGGTGA
AGTCTCCCCCCTGGCACATGAATCCGGGGATCACACGGTGGAAGGACGAG
CCCTTGTAGTGGAGTGGCTTGCCGGACTTGCCGATGCCTTTCTCGCCGGT
GCAGAGGGCGCGGAAGTTCTCGGCGGTTCGGGGGGTGACATCGGCGAAGA
GCTCCATCACGA
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