CF835252

Overview
NameCF835252
Unique NameCF835252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23
Identity = 65/147 (44.22%), Postives = 83/147 (56.46%), Query Frame = -3
Query:  276 VMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGS-SSGRTNKPVVI 710
            ++EL+ +  P+T +NF  L           K  +Y G  FHRVIP F+ Q             SIYG KF DE +    HTG GILSMANAGP TN SQFF+  A T WLDGKH +FG+VV G+ V K +  + + SS R  +P+ I
Sbjct:   14 LIELYTEHAPKTCQNFYTLA----------KEGYYDGVIFHRVIPDFVIQGGDPTGTGRGGT-SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKI 149          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus fumigatus GN=cyp1 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.197e-22
Identity = 60/136 (44.12%), Postives = 78/136 (57.35%), Query Frame = -3
Query:  303 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 707
            +EL+ +  P+T  NF  L   ++G        +Y    FHR+IP FM Q             SIYG KF DE     KHTG G+LSMAN+GP TNGSQFF+  A T WLDGKH +FG+V  GM V++ +  V ++S
Sbjct:   16 VELYNEHAPKTCRNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIHPGLKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNS 140          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.869e-22
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = -3
Query:  315 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 707
            +EL+ +  P+T +NF  L   ++G        +Y  + FHR+I  FM Q             SIYG KF DE     KHTG G+LSMANAGP TNGSQFF+  A T WLDGKH +FG+V +GM V++ +  V
Sbjct:   16 LELYTNHAPKTCKNFATLA--DRG--------YYDSTVFHRIIKDFMIQGGDPTGTGRGG-SSIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVKKGMGVIRRMGMV 136          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22
Identity = 60/127 (47.24%), Postives = 73/127 (57.48%), Query Frame = -3
Query:  330 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVK 707
            +EL+    P+T +NF  L   ++G        +Y    FHR+IP FM Q             SIYG KF DE     KHTG GILSMAN+GP TNGSQFFV  A T WLDGKH +FG+V  GM V++
Sbjct:   16 VELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQ 131          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22
Identity = 59/136 (43.38%), Postives = 78/136 (57.35%), Query Frame = -3
Query:  303 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 707
            +EL+    P+T +NF  L   ++G        +Y    FHR+IP FM Q             SIYG KF DE     KHTG GILSMAN+GP TNGSQFF+  A T WLDGKH +FG+V  GM +++ +  V +++
Sbjct:   16 VELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRMGLVKTNN 140          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: CYP15_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus oryzae GN=cyp15 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 65/143 (45.45%), Postives = 78/143 (54.55%), Query Frame = -3
Query:  282 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 707
            M LF D  P+  ENF           K+G   +Y    FHRVI GFM Q            ESI+G  F DE   + +H  P  +SMANAGP TNGSQFF+  A T WLD KH VFG+V  GMDVV +IE   +   +TNKP+
Sbjct:  490 MRLFPDAAPKAVENFTTHA-------KNG---YYDNLIFHRVIKGFMIQTGCPFGDGTGG-ESIWGDDFEDEFSREFRHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKHSVFGRVTAGMDVVHSIE--SAKVDKTNKPL 619          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL1_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus musculus GN=Ppil1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.859e-21
Identity = 60/137 (43.80%), Postives = 79/137 (57.66%), Query Frame = -3
Query:  303 VMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 710
            V+EL+    P+T +NF  L    +G        +Y G+ FHR+I  FM Q             SIYG +F DE     K TG GIL+MANAGP TNGSQFFV  A T+WLDGKH +FG+V +G+ +V  +  V ++S
Sbjct:   24 VLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNS 149          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL1_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.859e-21
Identity = 60/137 (43.80%), Postives = 79/137 (57.66%), Query Frame = -3
Query:  303 VMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 710
            V+EL+    P+T +NF  L    +G        +Y G+ FHR+I  FM Q             SIYG +F DE     K TG GIL+MANAGP TNGSQFFV  A T+WLDGKH +FG+V +G+ +V  +  V ++S
Sbjct:   24 VLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNS 149          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL1_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos taurus GN=PPIL1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.859e-21
Identity = 60/137 (43.80%), Postives = 79/137 (57.66%), Query Frame = -3
Query:  303 VMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 710
            V+EL+    P+T +NF  L    +G        +Y G+ FHR+I  FM Q             SIYG +F DE     K TG GIL+MANAGP TNGSQFFV  A T+WLDGKH +FG+V +G+ +V  +  V ++S
Sbjct:   24 VLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNS 149          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPNG (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger GN=cypC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.859e-21
Identity = 60/136 (44.12%), Postives = 77/136 (56.62%), Query Frame = -3
Query:  303 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 707
            +EL+    P+T +NF  L   ++G        +Y    FHR+IP FM Q             SIYG KF DE N   KHTG GILSMAN+GP  NGSQFF+  A   WLDGKH +FG+V  GM V++ +  V ++S
Sbjct:   16 VELYNAHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEINPNLKHTGAGILSMANSGPNNNGSQFFITLAPQPWLDGKHTIFGRVKSGMRVIQRMGLVKTNS 140          
The following BLAST results are available for this feature:
BLAST of CF835252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
PPIL1_SCHPO7.549e-2344.22Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]
PPIL1_ASPFU2.197e-2244.12Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_NEUCR2.869e-2244.70Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIL1_ASPOR3.747e-2247.24Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_EMENI4.893e-2243.38Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
CYP15_RHIOR8.347e-2245.45Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizo... [more]
PPIL1_MOUSE1.859e-2143.80Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus ... [more]
PPIL1_HUMAN1.859e-2143.80Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo... [more]
PPIL1_BOVIN1.859e-2143.80Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos ... [more]
PPIL1_ASPNG1.859e-2144.12Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835252 ID=CF835252; Name=CF835252; organism=Citrus sinensis; type=EST; length=712bp
TTTTTTTTTTTTTTTTTATAACAGACAAGCCCTATCTTATTTAAAAAGGC
TTCTCATAGAAAGACATAAAAAACAGTTCATCAGGAACCACCACCGGAGA
CCCGATCCAACCCGAACAAGTAACATAGCAGGAAAATTAGATAAAGATTA
AAAGTCCTACAGACACGGCCACATAATAATAGATAACATAATCACCATCA
CGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTATCATGATCAAA
TCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCTTGTTGGTCCTT
CCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACGTCCATTCCTTC
GACGACTTGACCGAACACAACGTGCTTCCCATCGAGCCACTCGGTCTTGG
CCGTACAGACGAAGAACTGAGATCCGTTGGTTCCGGGTCCGGCATTCGCC
ATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAGTTCTCATCGGC
GAATTTTGAGCCGTAGATTGATTCGCCTCCGGTTCCGTTTCCGGCGGTGA
AGTCTCCCCCCTGGCACATGAATCCGGGGATCACACGGTGGAAGGACGAG
CCCTTGTAGTGGAGTGGCTTGCCGGACTTGCCGATGCCTTTCTCGCCGGT
GCAGAGGGCGCGGAAGTTCTCGGCGGTTCGGGGGGTGACATCGGCGAAGA
GCTCCATCACGA
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