CF835252

Overview
NameCF835252
Unique NameCF835252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL1_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryptococcus neoformans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20
Identity = 59/143 (41.26%), Postives = 81/143 (56.64%), Query Frame = -3
Query:  282 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 707
            +EL+    P+T  NF  L   E+G        +Y G  FHR+IP FM Q             SIYG +FADE   + +  G GIL+MAN+GP TNGSQFF+  A T +LDGKH +FG+V  GM  ++ +E V   + + ++PV
Sbjct:   20 VELYTAHAPKTCNNFAKLA--ERG--------YYNGVIFHRIIPNFMIQGGDPTGTGRGGT-SIYGDRFADEIHPELRFVGAGILAMANSGPNTNGSQFFITCAPTPYLDGKHTIFGRVSSGMKTIQRLEAV--RTDKDDRPV 149          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPWD1_BOVIN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Bos taurus GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20
Identity = 60/142 (42.25%), Postives = 79/142 (55.63%), Query Frame = -3
Query:  285 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 707
            ++LF    P+T ENF   C   +         +Y G +FHR+I GFM Q            ESI+G +F DE +   +H  P  LSMANAG  TNGSQFF+    T WLD KH VFG+V +GM+VV+ I  V   + +T+KP
Sbjct:  503 IKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNV-KVNPKTDKP 632          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPWD1_PONAB (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Pongo abelii GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20
Identity = 60/141 (42.55%), Postives = 78/141 (55.32%), Query Frame = -3
Query:  285 ELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 704
            +LF    P+T ENF   C   +         +Y G +FHR+I GFM Q            ESI+G +F DE +   +H  P  LSMANAG  TNGSQFF+    T WLD KH VFG+V +GM+VV+ I  V   + +T+KP
Sbjct:  506 KLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNV-KVNPKTDKP 634          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPWD1_HUMAN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20
Identity = 60/141 (42.55%), Postives = 78/141 (55.32%), Query Frame = -3
Query:  285 ELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 704
            +LF    P+T ENF   C   +         +Y G +FHR+I GFM Q            ESI+G +F DE +   +H  P  LSMANAG  TNGSQFF+    T WLD KH VFG+V +GM+VV+ I  V   + +T+KP
Sbjct:  506 KLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNV-KVNPKTDKP 634          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20
Identity = 62/138 (44.93%), Postives = 79/138 (57.25%), Query Frame = -3
Query:  315 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXG-----ESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMD-VVKAIEKV 707
            +E+F +  P+TAENF ALC        SG   +Y  ++FHR IPGFM Q           G      SI+G KF DE     KH   GI+SMAN+GP TNGSQFF+  AK   LD K+ VFG+V++G D  +  +EKV
Sbjct:   14 IEVFCEAVPKTAENFLALCA-------SG---YYDNNTFHRNIPGFMIQVHEHLHTGDPTGTGKGGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKVIDGADSTLDMMEKV 141          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20
Identity = 58/143 (40.56%), Postives = 78/143 (54.55%), Query Frame = -3
Query:  282 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 707
            +EL+ +  P+  +NF  L           K  +Y  + FHR+I  FM Q            ESIYG KF DE   + KHTG GILSMAN+G  +NGSQFF+    T WLDGKH +FG+V  GM   K ++K+ +     +KP+
Sbjct:   17 LELYYNHAPKACKNFYEL----------SKRGYYDNTIFHRLIKDFMIQGGDPLGNGRGG-ESIYGKKFEDEITKELKHTGAGILSMANSGVNSNGSQFFITFGPTPWLDGKHTIFGRVKSGM---KVVQKMNAMQTNNDKPI 145          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20
Identity = 56/132 (42.42%), Postives = 75/132 (56.82%), Query Frame = -3
Query:  315 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 707
            +ELF + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G KF DE +   KH+  G++SMAN GP TNGSQFF+   K   LD K+ VFG+V++G++ +  +EK+
Sbjct:   14 IELFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPLGTGKGGT-SIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20
Identity = 59/142 (41.55%), Postives = 77/142 (54.23%), Query Frame = -3
Query:  285 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 707
            +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG G+LSMAN+GP TN SQFF+      +LD KH +FG+VV G D + A+E V  S  +T++P
Sbjct:  293 LELHCDLTPKTCENFIKLC----------KKQYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENV-ESDPKTDRP 422          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.982e-20
Identity = 60/142 (42.25%), Postives = 78/142 (54.93%), Query Frame = -3
Query:  285 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 707
            +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG GILSMAN+GP +N SQFF+      +LD KH +FG+VV G DV+ A+E V  S  +T++P
Sbjct:  293 LELHCDLTPKTCENFIRLC----------KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENV-ESDPKTDRP 422          
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19
Identity = 55/132 (41.67%), Postives = 74/132 (56.06%), Query Frame = -3
Query:  315 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 707
            +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G KF DE +   KH   G++SMAN GP TNGSQFF+   K   LD K+ VFG+V++G++ +  +EK+
Sbjct:   14 IEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
The following BLAST results are available for this feature:
BLAST of CF835252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
PPIL1_CRYNE1.205e-2041.26Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryp... [more]
PPWD1_BOVIN2.685e-2042.25Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_PONAB3.507e-2042.55Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_HUMAN3.507e-2042.55Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPIL3_RHIOR3.507e-2044.93Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhiz... [more]
CYPE_DICDI3.507e-2040.56Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]
PPIL3_CHICK4.580e-2042.42Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL2_MOUSE4.580e-2041.55Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL2_HUMAN5.982e-2042.25Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIL3_RAT1.020e-1941.67Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835252 ID=CF835252; Name=CF835252; organism=Citrus sinensis; type=EST; length=712bp
TTTTTTTTTTTTTTTTTATAACAGACAAGCCCTATCTTATTTAAAAAGGC
TTCTCATAGAAAGACATAAAAAACAGTTCATCAGGAACCACCACCGGAGA
CCCGATCCAACCCGAACAAGTAACATAGCAGGAAAATTAGATAAAGATTA
AAAGTCCTACAGACACGGCCACATAATAATAGATAACATAATCACCATCA
CGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTATCATGATCAAA
TCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCTTGTTGGTCCTT
CCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACGTCCATTCCTTC
GACGACTTGACCGAACACAACGTGCTTCCCATCGAGCCACTCGGTCTTGG
CCGTACAGACGAAGAACTGAGATCCGTTGGTTCCGGGTCCGGCATTCGCC
ATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAGTTCTCATCGGC
GAATTTTGAGCCGTAGATTGATTCGCCTCCGGTTCCGTTTCCGGCGGTGA
AGTCTCCCCCCTGGCACATGAATCCGGGGATCACACGGTGGAAGGACGAG
CCCTTGTAGTGGAGTGGCTTGCCGGACTTGCCGATGCCTTTCTCGCCGGT
GCAGAGGGCGCGGAAGTTCTCGGCGGTTCGGGGGGTGACATCGGCGAAGA
GCTCCATCACGA
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