CF835252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 43/119 (36.13%), Postives = 61/119 (51.26%), Query Frame = -3 Query: 354 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 707 +EL++ P+ NF LC +Y + FHRV+PGF+ Q ESIYG F DE + + G+++MANAGP NGSQFF + + L+ KH +FG+V Sbjct: 26 IELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = -3 Query: 354 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 707 +EL++ TP+ NF LC +Y G+ FHR++P F+ Q ESIYG F DE + + G+++MANAGP NGSQFF + + L+ KH +FG+V Sbjct: 26 IELWSKETPKACRNFVQLCMEG----------YYDGTIFHRMVPEFIVQGGDPTGTGTGG-ESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = -3 Query: 354 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 707 +EL++ P+ NF LC +Y + FHRV+PGF+ Q ESIYG+ F DE + + G+++MANAG NGSQFF + + L+ KH +FG+V Sbjct: 26 IELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: SDC10_MACFA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Macaca fascicularis GN=SDCCAG10 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = -3 Query: 354 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 707 +EL++ P+ NF LC +Y + FHRV+PGF+ Q ESIYG+ F DE + + G+++MANAG NGSQFF + + L+ KH +FG+V Sbjct: 26 IELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = -3 Query: 354 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 707 +EL++ P+ NF LC +Y + FHRV+PGF+ Q ESIYG+ F DE + + G+++MANAG NGSQFF + + L+ KH +FG+V Sbjct: 26 IELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: SDC10_XENLA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xenopus laevis GN=sdccag10 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 44/143 (30.77%), Postives = 67/143 (46.85%), Query Frame = -3 Query: 282 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 707 +EL++ P+ NF LC +Y + FHRV+P F+ Q ES++G F DE + + G+++MANAGP NGSQFF + + L+ KH +FG+V G + + G +PV Sbjct: 26 IELWSKEAPKACRNFVQLCLEG----------YYDNTIFHRVVPEFIIQGGDPTGTGTGG-ESVFGKPFRDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTIYNILRLAEVDIGEDERPV 156
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 46/121 (38.02%), Postives = 58/121 (47.93%), Query Frame = -3 Query: 348 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 707 +EL + P+ NF L +KG +YK +FHR I GFM Q ESI+G F DE KH G LSMAN G TN SQFF+ L+ KH +FG V++ Sbjct: 326 LELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVID 435
BLAST of CF835252 vs. ExPASy Swiss-Prot
Match: PPIL4_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 47/140 (33.57%), Postives = 67/140 (47.86%), Query Frame = -3 Query: 318 VMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADE-NFVK-------KHTGPGILSMANAGPGTNGSQFFVCTAKT-EWLDGKHVVFGQVVEGMDVVKAIEK 710 V++L+ + PR NF LC K +Y H V F+ Q ESI+G + D+ +F + KH G +SM N G +GSQF + T + ++LDG H VFG+V EGMD+VK I + Sbjct: 13 VIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIVKKINE 141 The following BLAST results are available for this feature:
BLAST of CF835252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 228
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835252 ID=CF835252; Name=CF835252; organism=Citrus sinensis; type=EST; length=712bpback to top |