CF835254

Overview
NameCF835254
Unique NameCF835254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8420 contig Csv1_Contig8420:76..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.410e-56
Identity = 118/220 (53.64%), Postives = 142/220 (64.55%), Query Frame = 3
Query:   75 ALNPLFSSVSSAFPPNPSLRFSSPKNDNGVVVCASK--NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYV 728
            AL+P       +  P+ SL FS        VV A+   + NN P+TGV+F PFEEVKK    +P     SLAR +F D  EA INEQINVEYNVSYVYH+M+AYFDRDNVA+KGL                K MEYQN+RGG+VKL  I+ P+SEF+HAEKGDALYAME                HKVA++N+D QLADFVESE+L EQ+EAIKKIS+Y+
Sbjct:   15 ALSPKPLLPHGSASPSVSLGFSRKVGGGRAVVVAAATVDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKKISDYI 234          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.574e-55
Identity = 111/200 (55.50%), Postives = 132/200 (66.00%), Query Frame = 3
Query:  132 RFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            R ++ ++   +   A+       L+GV+F PFEE+K EL LVP  P  SLARHKF DDCEAAINEQINVEYN SY YH++FAYFDRDNVALKG                 KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + +D QL DF+ESE+L EQ EAI K+S+YVA
Sbjct:   29 RVTAQRSGVSLSAAAAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDRSLARHKFVDDCEAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQLIDFIESEFLEEQGEAINKVSKYVA 228          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.020e-54
Identity = 123/233 (52.79%), Postives = 142/233 (60.94%), Query Frame = 3
Query:   75 ALNPLFSSVSSAFPPNPS-------------LRFSSPK-NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            AL P   S  S F P PS             L F + K     + VCAS      PLTGVIF PFEEVKK    VPT PQ+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L +I    SEF+H EKGDALYAME                H VA++N+D Q+ADF+ESE+L EQVE+IKKISEYVA
Sbjct:    2 ALAPSKVSTFSGFSPKPSVGGAQKNPTCSVSLSFLNEKLGSRNLRVCAS----TVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVA 230          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 213.001 bits (541), Expect = 1.332e-54
Identity = 123/233 (52.79%), Postives = 141/233 (60.52%), Query Frame = 3
Query:   75 ALNPLFSSVSSAFPPNPS-------------LRFSSPK-NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            AL P   S  S F P PS             L F + K     + VCAS      PLTGVIF PFEEVKK    VPT PQ+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA++N+D Q+ADF+ESE+L EQVE+IKKISEYVA
Sbjct:    2 ALAPSKVSTFSGFSPKPSVGGAQKNPTCSVSLSFLNEKLGSRNLRVCAS----TVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVA 230          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.282e-53
Identity = 105/187 (56.15%), Postives = 131/187 (70.05%), Query Frame = 3
Query:  168 VCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYV 728
            VCA+ +   +PLTGVIF PF+E+KK+   VP  P +SL+R  ++D+ EAAINEQINVEYNVSYVYH++FAYFDRDN+ALKGL                KL++YQN RGG+V L  I  P SEF+H EKGDALYAME                H VA++N+D QLADF+ESE+L+EQVE+IKKI+EYV
Sbjct:   48 VCAAASNAPAPLTGVIFEPFQELKKDYLAVPIAPNVSLSRQNYSDEAEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKKIAEYV 234          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.286e-53
Identity = 110/183 (60.11%), Postives = 125/183 (68.31%), Query Frame = 3
Query:  183 NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            +A+  PLTGVIF PFEEVKKE   VPT  Q+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA++N D QLADF+ESE+L EQVEAIKKISEYVA
Sbjct:   47 SASTVPLTGVIFEPFEEVKKEELAVPTAGQVSLARQYYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFARFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVEAIKKISEYVA 229          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 6.189e-52
Identity = 105/183 (57.38%), Postives = 123/183 (67.21%), Query Frame = 3
Query:  183 NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            +A  +PLTGVIF PFEEVKK+   VP+VP +SLAR  F D+CE+ INEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA +N+D+++  F+E EYL EQVEAIKKISEYVA
Sbjct:   46 SATTAPLTGVIFEPFEEVKKDYLAVPSVPLVSLARQNFADECESVINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEHREHAEKLMKYQNTRGGRVVLHPIKDVPSEFEHVEKGDALYAMELALSLEKLTNEKLLNVHSVAERNNDLEMTHFIEGEYLAEQVEAIKKISEYVA 228          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.938e-51
Identity = 104/188 (55.32%), Postives = 128/188 (68.09%), Query Frame = 3
Query:  168 VCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            VCA+ NA  +PL GVIF PF+E+KK+   VP    + LAR  + DD E+AINEQINVEYNVSYVYHA+FAYFDRDN+ALKGL                +L++YQN RGG+V L  I  P SEF+H+EKGDALYAME                H VA +N+D Q ADF+ESE+L+EQV++IKKI+EYVA
Sbjct:   46 VCAASNAP-APLAGVIFEPFQELKKDYLAVPIAHNVXLARQNYADDSESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVA 232          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.131e-24
Identity = 62/152 (40.79%), Postives = 83/152 (54.61%), Query Frame = 3
Query:  273 LSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYV 728
            +S AR  +  + EA IN QIN+E   SY Y +M  YFDRD+VAL G                 KLM+YQNKRGG++ LQ I  P    D  E G  L AM+                HK+   + D Q+ADF+ESE+L EQV++IK++S+Y+
Sbjct:    3 VSQARQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKP----DRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKELSDYI 150          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRIH1_XENLA (Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.622e-23
Identity = 61/151 (40.40%), Postives = 81/151 (53.64%), Query Frame = 3
Query:  276 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYV 728
            S  R  F  DCEAAIN  +N+E   SYVY +M  YFDRD+VAL  +                K ++YQNKRGG+V LQ I  P    +  E  + L AM+                HK+A+   D QL DF+ESEYL EQV+A+K++ +Y+
Sbjct:    3 SQVRQNFNSDCEAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKP----ERDEWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLESEYLEEQVKAMKELGDYI 149          
The following BLAST results are available for this feature:
BLAST of CF835254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRI1_ARATH5.410e-5653.64Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_MAIZE1.574e-5555.50Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRI_MALXI1.020e-5452.79Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI1_SOYBN1.332e-5452.79Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]
FRI3_VIGUN3.282e-5356.15Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI_PHAVU4.286e-5360.11Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI1_PEA6.189e-5257.38Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI2_SOYBN8.938e-5155.32Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRIS_LYMST7.131e-2440.79Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]
FRIH1_XENLA4.622e-2340.40Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835254 ID=CF835254; Name=CF835254; organism=Citrus sinensis; type=EST; length=731bp
CAAAAACATTTCATTAAAAAAAAATGTTGCTCGAAGCATCTTCAGCTTTA
TCCCTCGTGAGCCCCCAAAAGGAGGCTCTAAATCCTCTGTTTTCCTCTGT
TTCTTCAGCCTTTCCGCCGAACCCGAGTCTCCGTTTTTCTTCACCGAAAA
ATGATAACGGCGTGGTGGTTTGCGCCTCTAAAAATGCTAACAACAGCCCC
TTAACCGGCGTCATTTTTGCTCCCTTTGAAGAGGTGAAAAAGGAGCTCGA
TTTGGTCCCAACTGTGCCTCAACTGTCTCTTGCCAGACACAAGTTCACTG
ACGATTGTGAGGCCGCAATCAACGAGCAGATCAATGTGGAATACAATGTC
TCCTATGTGTATCATGCCATGTTTGCTTACTTTGACAGAGACAATGTCGC
GCTCAAGGGTCTCGCCAAGTTTTTCAAGGAATCAAGTGAAGAGGAAAGAG
AGCATGCTGAGAAATTGATGGAATATCAGAACAAACGAGGAGGTAAAGTG
AAGCTGCAATCAATATTGATGCCTCTCTCTGAGTTTGATCATGCTGAGAA
AGGAGATGCTTTGTATGCCATGGAGCTTACGCTGTCTCTGGAGAAGCTAA
CAAATGAGAAACTCCTCAACTTGCACAAGGTGGCCAACAAGAACCATGAT
GTGCAGTTGGCAGATTTCGTTGAAAGCGAGTATTTACATGAGCAGGTAGA
AGCCATCAAAAAGATATCTGAATATGTTGCT
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