CF835254

Overview
NameCF835254
Unique NameCF835254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8420 contig Csv1_Contig8420:76..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRIL1_RAT (Ferritin light chain 1 OS=Rattus norvegicus GN=Ftl1 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 5.122e-14
Identity = 44/151 (29.14%), Postives = 73/151 (48.34%), Query Frame = 3
Query:  276 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYV 728
            S  R  ++ + EAA+N  +N+    SY Y ++  +FDRD+VAL+G+                +L++ QN+RGG+   Q +  P  +    E G  L AME                H + +   D  L DF+ES +L ++V+ IKK+  ++
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQNERGGRALFQDVQKPSQD----EWGKTLEAMEAALALEKNLNQALLDLHALGSARTDPHLCDFLESHFLDKEVKLIKKMGNHL 149          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRIL_HUMAN (Ferritin light chain OS=Homo sapiens GN=FTL PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14
Identity = 45/151 (29.80%), Postives = 73/151 (48.34%), Query Frame = 3
Query:  276 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYV 728
            S  R  ++ D EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+   Q I  P  +    E G    AM+                H + +   D  L DF+E+ +L E+V+ IKK+ +++
Sbjct:    3 SQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAED----EWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHL 149          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRIL_FELCA (Ferritin light chain OS=Felis catus GN=FTL PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14
Identity = 44/151 (29.14%), Postives = 73/151 (48.34%), Query Frame = 3
Query:  276 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYV 728
            S  R  ++ + EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+     +  P  +    E G  L AME                H + +   D  L DF+E+ +L E+V+ IKK+ +++
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFLDVQKPSQD----EWGKTLDAMEAALLLEKNLNQGLLDLHALGSARADPHLCDFLENHFLDEEVKLIKKMGDHL 149          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRIL_BOVIN (Ferritin light chain OS=Bos taurus GN=FTL PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13
Identity = 43/151 (28.48%), Postives = 74/151 (49.01%), Query Frame = 3
Query:  276 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYV 728
            S  R  ++ + EAA+N  +N++   SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+     +  P  +    E G    AME                H +A+   D  + DF+E+ +L E+V+ IKK+ +++
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNMQLRASYTYLSLGFYFDRDDVALEGVGHFFRELAKEKREGAERLLKLQNQRGGRALFLDVQKPSQD----EWGKTQDAMEAALLVEKNLNQALLDLHGLASARGDPHICDFLENHFLDEEVKLIKKMGDHL 149          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRIL2_MOUSE (Ferritin light chain 2 OS=Mus musculus GN=Ftl2 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.320e-13
Identity = 42/151 (27.81%), Postives = 73/151 (48.34%), Query Frame = 3
Query:  276 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYV 728
            S  R  ++ + EAA+N  +N+    SY Y ++  +FDRD+VAL+G+                +L++ QN+RGG+   Q +  P  +    E G  L A++                H + +   D  L DF+ES +L ++V+ IKK+  ++
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQNERGGRALFQDVQKPSQD----EWGKTLEAIQAALRLEKNLNQALLDLHALGSARTDPHLCDFLESHFLDKEVKLIKKMGNHL 149          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FHL17_MOUSE (Ferritin heavy polypeptide-like 17 OS=Mus musculus GN=Fthl17 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11
Identity = 45/141 (31.91%), Postives = 60/141 (42.55%), Query Frame = 3
Query:  306 CEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYV 728
            CE AIN  I +    SY Y +M  YFDRD+VA +                    M  QNKRGG + LQ I  P  +  H        AME                H+VA +  D  L  F+E   L +QV+ +K++S Y+
Sbjct:   16 CEDAINTHIQLCLYASYEYMSMAVYFDRDDVAQENFKRFFLTKSHNCQTSAEMFMHLQNKRGGCISLQDIARPERDSWHG----GFQAMECAFHMEMLINQSLLNMHEVAKEKGDPHLCHFLEQNCLDQQVDILKEMSGYL 152          
The following BLAST results are available for this feature:
BLAST of CF835254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRIL1_RAT5.122e-1429.14Ferritin light chain 1 OS=Rattus norvegicus GN=Ftl... [more]
FRIL_HUMAN6.690e-1429.80Ferritin light chain OS=Homo sapiens GN=FTL PE=1 S... [more]
FRIL_FELCA6.690e-1429.14Ferritin light chain OS=Felis catus GN=FTL PE=2 SV... [more]
FRIL_BOVIN1.490e-1328.48Ferritin light chain OS=Bos taurus GN=FTL PE=2 SV=... [more]
FRIL2_MOUSE3.320e-1327.81Ferritin light chain 2 OS=Mus musculus GN=Ftl2 PE=... [more]
FHL17_MOUSE4.059e-1131.91Ferritin heavy polypeptide-like 17 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835254 ID=CF835254; Name=CF835254; organism=Citrus sinensis; type=EST; length=731bp
CAAAAACATTTCATTAAAAAAAAATGTTGCTCGAAGCATCTTCAGCTTTA
TCCCTCGTGAGCCCCCAAAAGGAGGCTCTAAATCCTCTGTTTTCCTCTGT
TTCTTCAGCCTTTCCGCCGAACCCGAGTCTCCGTTTTTCTTCACCGAAAA
ATGATAACGGCGTGGTGGTTTGCGCCTCTAAAAATGCTAACAACAGCCCC
TTAACCGGCGTCATTTTTGCTCCCTTTGAAGAGGTGAAAAAGGAGCTCGA
TTTGGTCCCAACTGTGCCTCAACTGTCTCTTGCCAGACACAAGTTCACTG
ACGATTGTGAGGCCGCAATCAACGAGCAGATCAATGTGGAATACAATGTC
TCCTATGTGTATCATGCCATGTTTGCTTACTTTGACAGAGACAATGTCGC
GCTCAAGGGTCTCGCCAAGTTTTTCAAGGAATCAAGTGAAGAGGAAAGAG
AGCATGCTGAGAAATTGATGGAATATCAGAACAAACGAGGAGGTAAAGTG
AAGCTGCAATCAATATTGATGCCTCTCTCTGAGTTTGATCATGCTGAGAA
AGGAGATGCTTTGTATGCCATGGAGCTTACGCTGTCTCTGGAGAAGCTAA
CAAATGAGAAACTCCTCAACTTGCACAAGGTGGCCAACAAGAACCATGAT
GTGCAGTTGGCAGATTTCGTTGAAAGCGAGTATTTACATGAGCAGGTAGA
AGCCATCAAAAAGATATCTGAATATGTTGCT
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